Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0595
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY034881-1|AAK58890.1|  156|Drosophila melanogaster Gustav protein.    29   6.4  
BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p pro...    29   8.5  
AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB...    29   8.5  
AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA...    29   8.5  

>AY034881-1|AAK58890.1|  156|Drosophila melanogaster Gustav protein.
          Length = 156

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 405 SSVSERSDHGHRSAEHGEHQCSLTSVRTASQSVPCLCQNNTLAAT 539
           SS   RS+H HR  +H       T++ T S S   +  ++T + T
Sbjct: 18  SSFGYRSEHPHRKPKHSNRSSPTTTMTTDSTSTSFMTTDSTPSET 62


>BT024230-1|ABC86292.1| 1283|Drosophila melanogaster LD24322p
           protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
 Frame = +1

Query: 37  GASRVAAFVKETAAAQAEHHAL-REPSRKEGLLPRIWRACVRRVRAHRPAAGR---DQRD 204
           GA RV    ++ A   +    L  E      L P     C RR R            Q D
Sbjct: 106 GAERVEIAAEQIAGISSSQELLDMEQDEYTALRPYPCDFCSRRFRKKATLNNHMLAHQND 165

Query: 205 RMRLCESCGRVFRRR 249
           R  LC+ CG  F RR
Sbjct: 166 RPHLCKLCGARFSRR 180


>AE014297-1869|AAF55074.1| 1283|Drosophila melanogaster CG7987-PB,
           isoform B protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
 Frame = +1

Query: 37  GASRVAAFVKETAAAQAEHHAL-REPSRKEGLLPRIWRACVRRVRAHRPAAGR---DQRD 204
           GA RV    ++ A   +    L  E      L P     C RR R            Q D
Sbjct: 106 GAERVEIAAEQIAGISSSQELLDMEQDEYTALRPYPCDFCSRRFRKKATLNNHMLAHQND 165

Query: 205 RMRLCESCGRVFRRR 249
           R  LC+ CG  F RR
Sbjct: 166 RPHLCKLCGARFSRR 180


>AE014297-1868|AAF55075.1| 1283|Drosophila melanogaster CG7987-PA,
           isoform A protein.
          Length = 1283

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 4/75 (5%)
 Frame = +1

Query: 37  GASRVAAFVKETAAAQAEHHAL-REPSRKEGLLPRIWRACVRRVRAHRPAAGR---DQRD 204
           GA RV    ++ A   +    L  E      L P     C RR R            Q D
Sbjct: 106 GAERVEIAAEQIAGISSSQELLDMEQDEYTALRPYPCDFCSRRFRKKATLNNHMLAHQND 165

Query: 205 RMRLCESCGRVFRRR 249
           R  LC+ CG  F RR
Sbjct: 166 RPHLCKLCGARFSRR 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,995,474
Number of Sequences: 53049
Number of extensions: 766499
Number of successful extensions: 2625
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2625
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)