Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0595
         (727 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   2.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   2.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   2.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   5.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.8  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   6.8  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 DYTNVYYGNNGTLACLNDPTTDIA 441
           DY ++Y G  G L CL     +IA
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIA 252



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 361 CAYDYTNVYYGNNGTLACLNDPTTDIA 441
           C       Y G  G L+CL D   D+A
Sbjct: 565 CKATNEETYRGGKGALSCLLDGKGDVA 591


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 DYTNVYYGNNGTLACLNDPTTDIA 441
           DY ++Y G  G L CL     +IA
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIA 252



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 361 CAYDYTNVYYGNNGTLACLNDPTTDIA 441
           C       Y G  G L+CL D   D+A
Sbjct: 565 CKATNEETYRGGKGALSCLLDGKGDVA 591


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 DYTNVYYGNNGTLACLNDPTTDIA 441
           DY ++Y G  G L CL     +IA
Sbjct: 229 DYPDIYSGYEGALRCLAHNGGEIA 252



 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +1

Query: 361 CAYDYTNVYYGNNGTLACLNDPTTDIA 441
           C       Y G  G L+CL D   D+A
Sbjct: 565 CKATNEETYRGGKGALSCLLDGKGDVA 591


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 657 RPANRIKRSKRCSAGRLFWTEPPR 586
           RP  R+K S  C+ G   W  P R
Sbjct: 140 RPIKRVKDSTNCNCG---WKNPSR 160


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 393 QQRYSSVSERSDHGHRSAEHG 455
           Q+R+   S   DH H+ AE G
Sbjct: 118 QERFGYFSSLKDHQHQFAELG 138


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 280 CERRPMLPGAGAVEKLSHSFHIIAFCLAD 194
           CE RP  P + AV+K     +   + +AD
Sbjct: 416 CEHRPFEPKSTAVQKYQDQDYQPIYFVAD 444


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +3

Query: 561  NCLLAYVVDAEVLSRRGDPLNNALNVLFDSLDAYFGYNTAAANQLINLDL 710
            N +L     A VLS   D ++ ++ V  D+L A +     + +++ NLD+
Sbjct: 1318 NKILRTCQKAVVLSMLLDEVDISMEVPSDALIALYSQGLFSLSEIDNLDV 1367


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +1

Query: 193 DQRDRMRLCESCGRVFRRR 249
           +Q D + +CE C R +R +
Sbjct: 30  EQSDTLYVCEFCNRRYRTK 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,478
Number of Sequences: 438
Number of extensions: 4490
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)