Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0594
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   153   2e-37
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   2.0  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AF125951-3|AAY86273.1|  244|Caenorhabditis elegans Hypothetical ...    28   8.0  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  153 bits (370), Expect = 2e-37
 Identities = 68/83 (81%), Positives = 76/83 (91%)
 Frame = +2

Query: 5   VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 184
           VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV  Q
Sbjct: 4   VKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQ 63

Query: 185 VAYSRIEGDHIVCAAYSHELPRY 253
           +AYS+IEGD +V +AYSHELPRY
Sbjct: 64  LAYSKIEGDVVVASAYSHELPRY 86



 Score =  102 bits (244), Expect = 3e-22
 Identities = 45/79 (56%), Positives = 59/79 (74%)
 Frame = +3

Query: 507 HVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGV 686
           +VPHS  RF G+D ESK++NAE HR  I G HVA+YM  L+++DED +KRQFSK++  G+
Sbjct: 171 NVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGL 230

Query: 687 TADAIEAIYKKAHEAIRAD 743
            AD + A Y+K H AIRAD
Sbjct: 231 NADNLVATYQKVHSAIRAD 249



 Score = 68.9 bits (161), Expect = 4e-12
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +1

Query: 256 VKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV-DNGPGAFRCYL 432
           +KVGLTNYAAAY+TG                          +YNVE   D  P  F+  L
Sbjct: 88  LKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGEDYNVEEEGDRAP--FKAVL 145

Query: 433 DVGLARTTTGARVFGAMKGAVDGGL 507
           D+GLARTTTG+++F  MKG  DGG+
Sbjct: 146 DIGLARTTTGSKIFAVMKGVADGGI 170


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 230  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 117
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 230  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 117
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +2

Query: 125 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 244
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>AF125951-3|AAY86273.1|  244|Caenorhabditis elegans Hypothetical
           protein D2063.4 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = -1

Query: 713 VDGFNSICSDS*FYVLAELSLERILIILFK--TSHVFSNMQTKDVSPVYFSIELF 555
           VDGF ++CS S   V + L ++++  +L +   +HV  ++  ++++ +   IE++
Sbjct: 53  VDGFRNVCSGSDLSVRSNLDVKQLSELLKEDPCTHVAGDVVIENLTDIAIPIEVY 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,011,103
Number of Sequences: 27780
Number of extensions: 362044
Number of successful extensions: 953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)