Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0593
(581 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.) 107 5e-24
SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.52
SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_55577| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_38693| Best HMM Match : DIE2_ALG10 (HMM E-Value=0.18) 28 6.4
SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 8.5
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 27 8.5
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.5
>SB_1564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 107 bits (258), Expect = 5e-24
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +2
Query: 242 CRGSGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLV 421
C G++T+D R++++P + + AL +E ARARIL AGGEILTFDQLA+RAP G+ TVL+
Sbjct: 187 CVVVGSITDDKRIFEVPALKICALRFSETARARILKAGGEILTFDQLALRAPLGQNTVLL 246
Query: 422 QGQRNAREAVRHFGPAPGAPRSHT 493
QG R AREA RH G APG P S T
Sbjct: 247 QGPRKAREAERHMGLAPGVPHSDT 270
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +3
Query: 9 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 188
GIDI KH +K R E SQ++ TNAKFNQIV++RL MSR RPP+
Sbjct: 109 GIDIEKKHPKKNYRREPVSQNVYIRLLVKLYRFLSRRTNAKFNQIVMKRLCMSRTKRPPL 168
Query: 189 SVSRLARHMKKPTREGLIAVVVG 257
S++RL R MK + I VVVG
Sbjct: 169 SLARLVRKMKASGHKDKICVVVG 191
>SB_43077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +1
Query: 286 DTEDDGGCSSCYRKSSCTH----FGCWRRNSYF*SAGYSCSDWQEDSTGTRS 429
D + G SC+ +C + +GC N+ F GYSCSD E + GT S
Sbjct: 785 DVNECGVSDSCHVNGTCVNTVGSYGCIC-NAGFTGDGYSCSDVDECTLGTHS 835
>SB_49884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 31.1 bits (67), Expect = 0.69
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 403 ASRSTN-SQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 287
ASR N S L+ S+N ++QNA T+FF + K H + Y
Sbjct: 13 ASRRANESTLLTSENNDIANQNADTAFFTSKKKRHNNNSY 52
>SB_55577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 374 DQLAIRAPTG-KKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRPRDMKKQGPV 538
D++ + +P + VL++ + ++HFGPA KP PRD+++ P+
Sbjct: 114 DKITMLSPYSLEMAVLLRLYFQGDDEIKHFGPATYQRPQADKPVQIPRDLRRFKPI 169
>SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 395 PTGKKTVLVQGQRNAREAVRHFGPAPGAP--RSHTKPYVRPRDMKKQGP 535
PT ++ L Q RN+R+ +R GP P P R P VRP + + GP
Sbjct: 50 PTYSRSYLNQNHRNSRD-IRDNGP-PWIPTRRKGDIPQVRPMEERDWGP 96
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 356 GEILTFDQLAIRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRS 487
GE+++ D++ +A + Q N EA R F P PG P S
Sbjct: 614 GEMMSDDEMKPKARCKRSQSTPIHQENREEAHRPFTPQPGRPLS 657
>SB_16461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 300 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVLRLARRQYW 419
RWL ++ + L H WL ++L +SWL+ +R W
Sbjct: 19 RWLNYV--RWLYHVRWLYHVRWLYHVSWLYHVRWLYHVRW 56
>SB_38693| Best HMM Match : DIE2_ALG10 (HMM E-Value=0.18)
Length = 583
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 269 HL*LSHYHGNQTLTSWLLHVARQTRHRDW 183
+L L H H N L ++ + RHRDW
Sbjct: 489 YLYLEHTHSNPVLVTFCRLLVMSLRHRDW 517
>SB_48685| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 390 VLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAQGT*KSK 530
V+R R+ W K +++V CV LA++ L + +F + +S+
Sbjct: 34 VIRNVHREGWQKSRDLIVLNCVLLAVIMLCAMLLIAVIFCRRAPRSR 80
>SB_24186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 390 VLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAQGT*KSK 530
V+R R+ W K +++V CV LA++ L + +F + +S+
Sbjct: 34 VIRNVHREGWQKSRDLIVLNCVLLAVIMLCAMLLIAVIFCRRAPRSR 80
>SB_42| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1207
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +2
Query: 344 LAAGGEILTFDQLAIRAPTGKKTVLVQGQRNAREAVRHFG 463
LA G T PT +T+ + GQ R A+R FG
Sbjct: 856 LATSGNTSTTISDNTATPTSSRTMQIPGQTQGRVALREFG 895
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 254 HYHGNQTLTSWLLHVARQTRHRDWW 180
HYH N+ L +L ++R WW
Sbjct: 342 HYHSNEVLKDYLEMLSRTGPRHGWW 366
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 397 RSTNSQLIKS-KNFSSSSQNACTSFFGNMKSS 305
R TN +L S K+F +++++C + F N+ SS
Sbjct: 464 RRTNRRLTSSLKDFQKATKSSCVTSFSNLSSS 495
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 475 SWSRAKVTHCLTSISLTLYQY 413
+W RAKV HC +S S+T+ QY
Sbjct: 2539 TWYRAKVLHCDSSFSITV-QY 2558
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,414,028
Number of Sequences: 59808
Number of extensions: 413736
Number of successful extensions: 1134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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