BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0593
(581 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450 CY... 26 1.0
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 25 1.8
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 25 2.4
AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein. 24 4.1
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 23 5.5
Z69976-1|CAA93816.1| 204|Anopheles gambiae ribosomal protein RL... 23 9.5
>AF487533-1|AAL93294.1| 531|Anopheles gambiae cytochrome P450
CYP9K1 protein.
Length = 531
Score = 25.8 bits (54), Expect = 1.0
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 437 AREAVRHFGPAPGAPRSHTKPYV 505
A E +R + PAP R+ TKPY+
Sbjct: 387 ANETLRKWTPAPFLDRTCTKPYM 409
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 25.0 bits (52), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 232 SRVGFFMWRAKRDTEIGGRLIRLIKSRRRTI 140
+RVG +W +K E R + IKS+RR +
Sbjct: 266 ARVGLELWGSKSIGECTQRQLDNIKSKRRVV 296
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 24.6 bits (51), Expect = 2.4
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -3
Query: 264 VTVPLPRQSNPHELASSCGAPNETQRLVAG*YGS*RAGVERSD*IWH 124
VT PLP S P L PN +Q G + +G+ R +H
Sbjct: 352 VTAPLPGPSPPSSLGMPGNIPNLSQLDATGGQSASTSGLPRGIYTYH 398
>AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein.
Length = 163
Score = 23.8 bits (49), Expect = 4.1
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +2
Query: 368 TFDQLAIRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRPRD 517
T L + TG T V N+ P+P AP S +K P+D
Sbjct: 15 TATSLPVAPGTGPTTPGVYSAPNSMLVTGSMPPSPYAPLSMSKSQTPPQD 64
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 23.4 bits (48), Expect = 5.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 464 PAPGAPRSHTKPYVRPRDMKKQGPVVVLM 550
P P +PRS T+P R ++++ V+VL+
Sbjct: 2 PLPRSPRSRTRP---ARGVRREPAVLVLV 27
>Z69976-1|CAA93816.1| 204|Anopheles gambiae ribosomal protein RL10
protein.
Length = 204
Score = 22.6 bits (46), Expect = 9.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 377 QLAIRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRP 511
+L +A TG ++ + R+ H G G P+SH ++P
Sbjct: 50 RLGYKAKTGFSIFRIRVRCGGRKRPVHKGCTYGKPKSHGVNQLKP 94
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,648
Number of Sequences: 2352
Number of extensions: 12651
Number of successful extensions: 21
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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