Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0593
         (581 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18 pro...   120   3e-27
DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18 p...   120   3e-27
BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18 p...   120   3e-27
BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18 p...   120   3e-27
BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18 p...   120   3e-27
AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18 p...   120   3e-27

>L11566-1|AAA16329.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 84  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173



 Score = 96.3 bits (229), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 185
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 186 ISVSRLARHMKKPTREGLIAVVVG 257
           +S+SR+ R MK P RE   AVVVG
Sbjct: 61  LSLSRMIRKMKLPGRENKTAVVVG 84


>DQ403032-1|ABD77165.1|  164|Homo sapiens ribosomal protein L18
           protein.
          Length = 164

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 61  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 120

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 121 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 150



 Score = 67.3 bits (157), Expect = 4e-11
 Identities = 31/46 (67%), Positives = 37/46 (80%)
 Frame = +3

Query: 120 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 257
           TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE   AVVVG
Sbjct: 16  TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVG 61


>BC021743-1|AAH21743.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 84  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173



 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 47/84 (55%), Positives = 54/84 (64%)
 Frame = +3

Query: 6   MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 185
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 186 ISVSRLARHMKKPTREGLIAVVVG 257
           + +SR+ R MK P RE   AVVVG
Sbjct: 61  LCLSRMIRKMKLPGRENKTAVVVG 84


>BC009708-1|AAH09708.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 84  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173



 Score = 96.3 bits (229), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 185
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 186 ISVSRLARHMKKPTREGLIAVVVG 257
           +S+SR+ R MK P RE   AVVVG
Sbjct: 61  LSLSRMIRKMKLPGRENKTAVVVG 84


>BC000374-1|AAH00374.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 84  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173



 Score = 96.3 bits (229), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 185
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 186 ISVSRLARHMKKPTREGLIAVVVG 257
           +S+SR+ R MK P RE   AVVVG
Sbjct: 61  LSLSRMIRKMKLPGRENKTAVVVG 84


>AB061825-1|BAB79463.1|  188|Homo sapiens ribosomal protein L18
           protein.
          Length = 188

 Score =  120 bits (290), Expect = 3e-27
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = +2

Query: 254 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAIRAPTGKKTVLVQGQR 433
           GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLA+ +P G  TVL+ G R
Sbjct: 84  GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143

Query: 434 NAREAVRHFGPAPGAPRSHTKPYVRPRDMK 523
             RE  RHFG APG P SHTKPYVR +  K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173



 Score = 96.3 bits (229), Expect = 7e-20
 Identities = 48/84 (57%), Positives = 55/84 (65%)
 Frame = +3

Query: 6   MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 185
           MG+DI H  DRKVRR E KSQDI               TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1   MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60

Query: 186 ISVSRLARHMKKPTREGLIAVVVG 257
           +S+SR+ R MK P RE   AVVVG
Sbjct: 61  LSLSRMIRKMKLPGRENKTAVVVG 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,078,980
Number of Sequences: 237096
Number of extensions: 2157582
Number of successful extensions: 4476
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4475
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)