Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0591
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    27   0.14 
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    27   0.14 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    25   0.58 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.3  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.5  

>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 103 KTRCGESQRGKEAKSETPKAGQGGGSR*S*KVQTGA*KAVQRI*SQAHGYQEGVAAKID- 279
           K +C  +  G+E K + P+A Q G ++ + K + G  K +  +      + + + +K D 
Sbjct: 50  KGKC--TPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENKPNWWQELESKFDP 107

Query: 280 -AETKVKIEEMNK 315
             E K K +E+ K
Sbjct: 108 QGEYKKKYDELLK 120


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +1

Query: 103 KTRCGESQRGKEAKSETPKAGQGGGSR*S*KVQTGA*KAVQRI*SQAHGYQEGVAAKID- 279
           K +C  +  G+E K + P+A Q G ++ + K + G  K +  +      + + + +K D 
Sbjct: 50  KGKC--TPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHLIENKPNWWQELESKFDP 107

Query: 280 -AETKVKIEEMNK 315
             E K K +E+ K
Sbjct: 108 QGEYKKKYDELLK 120


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 17/76 (22%), Positives = 39/76 (51%)
 Frame = +1

Query: 103 KTRCGESQRGKEAKSETPKAGQGGGSR*S*KVQTGA*KAVQRI*SQAHGYQEGVAAKIDA 282
           K +C  +  G+E K + P+A Q   ++ + K + G  K +  +      + + + AK D 
Sbjct: 50  KGKC--TPEGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHLIKNKPNWWQELEAKFDP 107

Query: 283 ETKVKIEEMNKMVQTQ 330
           + + K ++ NK+++ +
Sbjct: 108 KGEYK-QKYNKLLEKE 122


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -3

Query: 215 FHAPVCTFQLHLEPPP 168
           FHA   +  LH  PPP
Sbjct: 151 FHAAATSLPLHYPPPP 166


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 338 ASFCVWTILFISSILTLVSASILAATPSWY 249
           +SF VW ++  +  L L+  S++  +  W+
Sbjct: 229 SSFVVWPLVENNPTLYLIPVSVILISVGWW 258


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -3

Query: 338 ASFCVWTILFISSILTLVSASILAATPSWY 249
           +SF VW ++  +  L L+  S++  +  W+
Sbjct: 229 SSFVVWPLVENNPTLYLIPVSVILISVGWW 258


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 356 KTSLMTASFCVWTILF-ISSILTLVSASILAATPS 255
           KT L T  +C + ILF +S  + LV  + L  TP+
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYYASLDETPN 347


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 41  FLCVFDMASQTQGIQQLLAAEKR 109
           F+CV  + S+ +G+Q +   +KR
Sbjct: 345 FVCVNTLVSEQEGLQLINEMKKR 367


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/27 (22%), Positives = 14/27 (51%)
 Frame = +1

Query: 502 IIEQAYVGRFSWSRLN*KKTQQGAENE 582
           ++   Y+G   W ++   ++Q+G   E
Sbjct: 102 VVVMGYIGFIEWDKVEIVRSQEGRFEE 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,882
Number of Sequences: 336
Number of extensions: 2695
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)