Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0591
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p pro...    62   5e-10
AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar pro...    62   5e-10
AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA...    62   5e-10

>AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p
           protein.
          Length = 117

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = +1

Query: 247 GYQEGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 399
           G +EGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 64  GSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 59  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 238
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 239 KHMGTRK 259
           KHMG+R+
Sbjct: 61  KHMGSRE 67


>AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar
           proton-motive ATPasesubunit G VHA13 protein.
          Length = 117

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = +1

Query: 247 GYQEGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 399
           G +EGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 64  GSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 59  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 238
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 239 KHMGTRK 259
           KHMG+R+
Sbjct: 61  KHMGSRE 67


>AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA
           protein.
          Length = 117

 Score = 62.5 bits (145), Expect = 5e-10
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = +1

Query: 247 GYQEGVAAKIDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 399
           G +EGVAAKIDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 64  GSREGVAAKIDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114



 Score = 48.8 bits (111), Expect = 7e-06
 Identities = 28/67 (41%), Positives = 34/67 (50%)
 Frame = +2

Query: 59  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 238
           MASQTQGIQQLLAAEK+AAEKV+                  +E+               A
Sbjct: 1   MASQTQGIQQLLAAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEA 60

Query: 239 KHMGTRK 259
           KHMG+R+
Sbjct: 61  KHMGSRE 67


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,579,315
Number of Sequences: 53049
Number of extensions: 452832
Number of successful extensions: 1316
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)