Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0590
(707 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative / ga... 33 0.14
At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative / ga... 33 0.14
At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative / ga... 33 0.14
At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PU... 32 0.43
At5g33210.1 68418.m03923 zinc finger protein-related similar to ... 31 0.57
At3g51060.1 68416.m05591 zinc finger protein, putative / lateral... 31 0.57
At5g42620.1 68418.m05188 expressed protein 30 1.3
At3g44200.1 68416.m04739 protein kinase family protein contains ... 30 1.3
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 29 4.0
At2g19490.1 68415.m02278 recA family protein contains Pfam profi... 29 4.0
At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kina... 29 4.0
At3g44820.1 68416.m04829 phototropic-responsive NPH3 family prot... 28 7.0
At1g06590.1 68414.m00698 expressed protein 28 7.0
At5g37630.1 68418.m04532 chromosome condensation family protein ... 27 9.2
At3g04580.2 68416.m00487 ethylene receptor, putative (EIN4) simi... 27 9.2
At3g04580.1 68416.m00486 ethylene receptor, putative (EIN4) simi... 27 9.2
At2g42160.1 68415.m05218 zinc finger (ubiquitin-hydrolase) domai... 27 9.2
>At1g78660.3 68414.m09168 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 348
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DTAFVRLTGGAGGCY---AHVGYWESRGVHVLNLARNEPGVGCFRHATIVHEWMHILGFL 426
D A RLT Y ++V + E+ G V+ L NEP F+ +V+ G +
Sbjct: 65 DGASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQKLELVN------GVI 118
Query: 427 HMQSTHNRDDYVKIVKENITPGLQHNFASTH 519
+ DY +IVK+ T L+ N A H
Sbjct: 119 FTGGWAKKYDYFEIVKKIFTKALERNDAGEH 149
>At1g78660.2 68414.m09169 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 347
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DTAFVRLTGGAGGCY---AHVGYWESRGVHVLNLARNEPGVGCFRHATIVHEWMHILGFL 426
D A RLT Y ++V + E+ G V+ L NEP F+ +V+ G +
Sbjct: 64 DGASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQKLELVN------GVI 117
Query: 427 HMQSTHNRDDYVKIVKENITPGLQHNFASTH 519
+ DY +IVK+ T L+ N A H
Sbjct: 118 FTGGWAKKYDYFEIVKKIFTKALERNDAGEH 148
>At1g78660.1 68414.m09167 gamma-glutamyl hydrolase, putative /
gamma-Glu-X carboxypeptidase, putative / conjugase,
putative similar to SP|O65355 Gamma-glutamyl hydrolase
precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase)
(Conjugase) (GH) {Arabidopsis thaliana}
Length = 348
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 DTAFVRLTGGAGGCY---AHVGYWESRGVHVLNLARNEPGVGCFRHATIVHEWMHILGFL 426
D A RLT Y ++V + E+ G V+ L NEP F+ +V+ G +
Sbjct: 65 DGASGRLTNDTSSTYIAASYVKFAEAGGARVIPLIYNEPEEVLFQKLELVN------GVI 118
Query: 427 HMQSTHNRDDYVKIVKENITPGLQHNFASTH 519
+ DY +IVK+ T L+ N A H
Sbjct: 119 FTGGWAKKYDYFEIVKKIFTKALERNDAGEH 149
>At1g09830.1 68414.m01105 phosphoribosylamine--glycine ligase (PUR2)
Identical to phosphoribosylamine--glycine ligase,
chloroplast [precursor] SP:P52420 from [Arabidopsis
thaliana]
Length = 532
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 167 FGPRQQAAIEEGIRDIEKHTCLKFRYREAETQPLSDSPA 283
FGP QAA EG ++ K+ C K+ A+ + SD+ A
Sbjct: 187 FGPSSQAAALEGSKNFMKNLCHKYNIPTAKYKTFSDASA 225
>At5g33210.1 68418.m03923 zinc finger protein-related similar to
lateral root primordium 1 (LRP1) [Arabidopsis thaliana]
GI:882341; contains Pfam profile PF05142: Domain of
unknown function (DUF702), TIGR01623: putative zinc
finger domain, LRP1 type
Length = 173
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 201 GSETSKN-THASSSVTARLRHSLCQTHRRSWWMLCPRRLLGITRRARVEPCPQRARSGLF 377
G++ K+ +H + R C TH RS W+ +R + A V+P Q R
Sbjct: 56 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPATKRRERQQQLATVQPQTQLPRGESV 115
Query: 378 PPRH 389
P RH
Sbjct: 116 PKRH 119
>At3g51060.1 68416.m05591 zinc finger protein, putative / lateral
root primordium (LRP) protein-related similar to lateral
root primordium 1 (LRP1) [Arabidopsis thaliana]
GI:882341; contains Pfam profile PF05142: Domain of
unknown function (DUF702)
Length = 252
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +3
Query: 201 GSETSKN-THASSSVTARLRHSLCQTHRRSWWMLCPRRLLGITRRARVEPCPQRARSGLF 377
G++ K+ +H + R C TH RS W+ +R + A V+P Q R
Sbjct: 148 GNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQPQTQLPRGESV 207
Query: 378 PPRH 389
P RH
Sbjct: 208 PKRH 211
>At5g42620.1 68418.m05188 expressed protein
Length = 841
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 370 GCFRHATIVHEWMHILGFLHMQSTHNRDD 456
G AT++HE MH+LGF H RD+
Sbjct: 284 GTLLSATLIHEVMHVLGFDPHAFAHFRDE 312
>At3g44200.1 68416.m04739 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 941
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 369 GLFPPRHHRARVDAHPRLPP 428
G FPP+HH +D+ P+L P
Sbjct: 445 GSFPPKHHMPVIDSSPKLKP 464
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +3
Query: 381 PRHHRARVDAHPRLPPHAVHPQQRRLC 461
PRHHR R+ + +L H H + +C
Sbjct: 125 PRHHRQRIKSVEQLKGHLYHKHKLHMC 151
>At2g19490.1 68415.m02278 recA family protein contains Pfam profile:
PF00154 recA bacterial DNA recombination protein
Length = 430
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 102 ALRPIAYCLSRISIMKSSRTISPWNLPLFSSG 7
AL I + SIM R +SP N+P+FS+G
Sbjct: 65 ALDQITSSFGKGSIMYLGRAVSPRNVPVFSTG 96
>At1g34260.1 68414.m04252 phosphatidylinositol-4-phosphate 5-kinase
family protein low similarity to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profile PF01504: Phosphatidylinositol-4-phosphate
5-Kinase
Length = 1456
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 208 RHRKTHMPQVPLPRG*DTAFVRLTGGAGGCYAHVGYWESRGVHVLN 345
R + +P+ G D +++ G A G VG WES G HV +
Sbjct: 457 RESPSEAVDIPVSNGFDEQTIQINGEADG--EKVGTWESDGDHVFS 500
>At3g44820.1 68416.m04829 phototropic-responsive NPH3 family protein
contains NPH3 family domain, Pfam:PF03000
Length = 661
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 480 VFFDDLNIVVSVVGGLHVEEAEDVHPLVHDGG 385
+FF+ +++ ++ GGL+V E H + GG
Sbjct: 513 LFFEQMHLRTALAGGLNVANTETAHAVTIPGG 544
>At1g06590.1 68414.m00698 expressed protein
Length = 916
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -3
Query: 129 GHLVLGHVYALRPIAYCLS-RISIMKSSRTIS 37
G+ VLG YAL I++C S + ++K+S T++
Sbjct: 758 GNAVLGLPYALASISFCQSFNLDLLKASATLT 789
>At5g37630.1 68418.m04532 chromosome condensation family protein
contains pfam profile: PF04154 chromosome condensation
protein 3, C-terminal region
Length = 1051
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 454 DYVKIVKENITPGLQHNFASTHKISLVT 537
DYV +VK +I G H+FAS + L T
Sbjct: 420 DYVDLVKAHIEAGPNHHFASRQLLLLGT 447
>At3g04580.2 68416.m00487 ethylene receptor, putative (EIN4) similar
to ethylene receptor GB:AAC31123 [Malus domestica],
identical to putative ethylene receptor GB:AAD02485
[Arabidopsis thaliana]; Pfam HMM hit: response regulator
receiver domain, signal C terminal domain
Length = 766
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 214 DVSDPLLDGGLLTRTKFPLSKFPNNGVVRPLSIG 113
++ +P LDG + P ++ +NG+ LS+G
Sbjct: 547 EIQNPPLDGSAMAMRHIPNRRYHSNGIKEGLSLG 580
>At3g04580.1 68416.m00486 ethylene receptor, putative (EIN4) similar
to ethylene receptor GB:AAC31123 [Malus domestica],
identical to putative ethylene receptor GB:AAD02485
[Arabidopsis thaliana]; Pfam HMM hit: response regulator
receiver domain, signal C terminal domain
Length = 766
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 214 DVSDPLLDGGLLTRTKFPLSKFPNNGVVRPLSIG 113
++ +P LDG + P ++ +NG+ LS+G
Sbjct: 547 EIQNPPLDGSAMAMRHIPNRRYHSNGIKEGLSLG 580
>At2g42160.1 68415.m05218 zinc finger (ubiquitin-hydrolase)
domain-containing protein similar to BRCA1-associated
protein 2 [Homo sapiens] GI:3252872; contains Pfam
profile PF02148: Zn-finger in ubiquitin-hydrolases and
other protein
Length = 488
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -3
Query: 162 PSPNSQTTVLFGHLVLGHVYALRPIAYCLSRIS 64
P+P+S++T LF V ++ +L I +C SRIS
Sbjct: 63 PNPSSRSTTLFIVAVPNYLSSLDFIRFCDSRIS 95
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,103,096
Number of Sequences: 28952
Number of extensions: 399954
Number of successful extensions: 1097
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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