Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0589
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   6.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   6.4  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.4  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 686 QGQPPEICY 712
           +G+PP ICY
Sbjct: 114 EGEPPRICY 122


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 686 QGQPPEICY 712
           +G+PP ICY
Sbjct: 114 EGEPPRICY 122


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 5/15 (33%), Positives = 9/15 (60%)
 Frame = +1

Query: 160 AALWLSTPSWRIRVY 204
           + +WL  PSW +  +
Sbjct: 312 STMWLKDPSWLVNAF 326


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 294 SPCASTATCYDY 329
           SPC + ATC D+
Sbjct: 68  SPCLNGATCQDH 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,093
Number of Sequences: 336
Number of extensions: 3749
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)