Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0589
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0738 + 21093024-21093454,21093540-21093964,21094076-210942...    29   5.5  
12_01_0247 - 1836971-1837810                                           28   7.3  
06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,368...    28   7.3  
01_02_0045 - 10576475-10577198,10578347-10578504                       28   7.3  
08_02_1243 - 25527523-25527960,25527993-25528604                       28   9.7  
08_01_0685 + 6025975-6026074,6026168-6026357,6026963-6027034,602...    28   9.7  
07_03_1050 - 23570785-23570824,23570938-23571004,23571114-235711...    28   9.7  
06_03_1143 + 27971561-27972670,27973868-27974458                       28   9.7  

>07_03_0738 +
           21093024-21093454,21093540-21093964,21094076-21094201,
           21094277-21094398,21094496-21094706,21095038-21095275,
           21095351-21095498,21095640-21095975
          Length = 678

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 651 GNSHSGEPLYIARVNHLKSVTPGKVHPSH 737
           GN++ G   + A +NHL +  PG V  +H
Sbjct: 33  GNTYVGNSTFEANLNHLAAELPGNVSTAH 61


>12_01_0247 - 1836971-1837810
          Length = 279

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 9/37 (24%), Positives = 23/37 (62%)
 Frame = +1

Query: 460 WVIRSHHSGELIPGKLASNTDRLIYLTREKKSLSITL 570
           W++ +H   + +P  +A++  +++YL R+ K   ++L
Sbjct: 74  WLLMTHIPSQSLPDSVAASGCKVVYLCRDPKDCFVSL 110


>06_01_0510 + 3681369-3681645,3682825-3682886,3683016-3683165,
            3683776-3683952,3684496-3684711,3684802-3686480,
            3686602-3686667,3686753-3686822,3686909-3687547
          Length = 1111

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +1

Query: 43   KLYDCLTIIKNIDFCAFLK*VNVSLNKNVEHSTEWSPASAALWLSTPSWRIRVY 204
            K+  CL + K I+ C+FL+   + L   V H     P S A   +TP+WR   Y
Sbjct: 934  KIIMCLKMSKLINDCSFLQKQQMLLQAAVSHPHR--PISVA---TTPAWRASRY 982


>01_02_0045 - 10576475-10577198,10578347-10578504
          Length = 293

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +2

Query: 572 GSLCSWKRPTLGTSIQR 622
           GS  SW RP+LGT I+R
Sbjct: 191 GSTASWPRPSLGTRIRR 207


>08_02_1243 - 25527523-25527960,25527993-25528604
          Length = 349

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 463 VIRSHHSGELIPGKLASNTDRLIYLTREKKSLSITL 570
           ++ +H   +L+P ++A    R++YL RE K + ++L
Sbjct: 163 LLSTHMPPQLLPRRVAELGCRIVYLCREPKDVVVSL 198


>08_01_0685 +
           6025975-6026074,6026168-6026357,6026963-6027034,
           6027187-6027258,6027354-6027425,6027784-6027855,
           6027980-6028051,6028134-6028205,6028483-6028554,
           6028791-6028865,6028970-6029041,6029134-6029199,
           6029267-6029332,6029409-6029453,6029542-6029606,
           6029697-6030076,6030455-6030653,6030725-6030883,
           6030966-6031084,6031156-6031200,6031226-6031791,
           6031871-6032021,6032117-6032454,6033702-6033765,
           6034329-6034370,6035572-6035575,6035853-6036039,
           6037252-6037323,6037687-6037758,6037867-6037938,
           6038019-6038090,6038651-6038725,6038815-6038886,
           6038988-6039053,6039163-6039228,6039348-6039392,
           6039469-6039533,6039615-6039994,6040070-6040202,
           6040354-6040512,6040599-6040717,6040805-6041015,
           6041155-6041386,6041469-6041619,6041725-6042084
          Length = 1952

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +3

Query: 618 NGQVPVGAIPA-----GNSHSGEPLYIARVNHLKSVTPGKVHPSHGCC 746
           NG +P G + A      +SH G+  ++  V  + SV    +   HGCC
Sbjct: 695 NGMLPDGRVIAVKQLSQSSHQGKNQFVTEVATISSVQHRNLVKLHGCC 742


>07_03_1050 -
           23570785-23570824,23570938-23571004,23571114-23571196,
           23572028-23572201,23572268-23572471,23572570-23573300
          Length = 432

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 126 CRTFHRMVPRLRRPMVIHPILEDSRI 203
           C+ FH  VP L  P  +HP    S++
Sbjct: 153 CQFFHGSVPELHNPRQVHPFASLSKL 178


>06_03_1143 + 27971561-27972670,27973868-27974458
          Length = 566

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +1

Query: 109 VSLNKNVEHSTEWSPASAALWLSTPSWRIRVYTHAGPSDDADV 237
           V  + +VE  T W   + A W    +WR   +   G   D D+
Sbjct: 433 VPADASVEFYTAWVTENPATWPDPEAWRPERFLEGGEGFDTDI 475


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,555,987
Number of Sequences: 37544
Number of extensions: 423928
Number of successful extensions: 1107
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)