Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0587
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z81051-12|CAB02861.2|  228|Caenorhabditis elegans Hypothetical p...    29   3.6  
U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor staphylo...    28   4.7  
AF067216-14|AAC17517.4|  729|Caenorhabditis elegans Hypothetical...    28   6.2  
Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical pr...    27   8.2  
AF038608-12|AAY86214.1|  132|Caenorhabditis elegans Hypothetical...    27   8.2  

>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 298 LDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKSLRNG 438
           + IGKK  E    K    KELKKN  +   A  +    A+AK  + G
Sbjct: 443 VSIGKKFDEAQINKLQTEKELKKNAQKQANAAKMREKRAKAKEEQEG 489


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +1

Query: 298 LDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKSLRNG 438
           + IGKK  E    K    KELKKN  +   A  +    A+AK  + G
Sbjct: 443 VSIGKKFDEAQINKLQTEKELKKNAQKQANAAKMREKRAKAKEEQEG 489


>Z81051-12|CAB02861.2|  228|Caenorhabditis elegans Hypothetical
           protein C55A6.1 protein.
          Length = 228

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -3

Query: 613 DLNGINIKSLVPI--KALLVVNFNSCSNFLAVNTNNSK*AVNLF 488
           D +GI +K L  I     L+  FN C N   V+ ++SK  V+ F
Sbjct: 181 DFDGIGVKGLAGIFVPTSLISMFNDCCNVKPVSKSSSKYVVHTF 224


>U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor
           staphylococcal nuclease homologprotein 1 protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +1

Query: 274 PKSKDVQTLDIGKKLVELGFAKASFPKELKKNTIESQIAPALLSAEAQAKSLRNGIWS 447
           P     + +++ + LVE G A   F  E       S    ALLSAE +AK  +  IW+
Sbjct: 616 PDGNTSRAINLSEALVENGLASLHFTAE------RSGHYNALLSAENKAKKAKKNIWA 667


>AF067216-14|AAC17517.4|  729|Caenorhabditis elegans Hypothetical
           protein C35E7.1 protein.
          Length = 729

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/58 (25%), Positives = 24/58 (41%)
 Frame = +1

Query: 349 PKELKKNTIESQIAPALLSAEAQAKSLRNGIWSENLPPIPAYIVYWRKGSQLTWSYLY 522
           PKE   +   S   P+LL+           +WSE+L     +   W   S++   Y+Y
Sbjct: 200 PKEFYFDREFSCFMPSLLTVPEDILYPEYSVWSESLKKHVTFTAVWNGRSEIIEQYVY 257


>Z74034-2|CAE17843.1|  323|Caenorhabditis elegans Hypothetical
           protein F43A11.4 protein.
          Length = 323

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 23  LKGLYAGVQHSPVRVLVNHKAPIYLPLWHSS 115
           +  LYAG+Q+    + +N    +Y+P+++S+
Sbjct: 92  VNSLYAGLQYCGFLIAINRFCAMYIPMFYST 122


>AF038608-12|AAY86214.1|  132|Caenorhabditis elegans Hypothetical
           protein C09G12.17 protein.
          Length = 132

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -1

Query: 255 SVETRSSLSLPIGFNVTCWPLATHSSQLTAFPLTTSIPHSLTGSGGLLECHSGKYI 88
           SV T  S   P  +++TC P  T+ +   +      I   +TG    L C  G ++
Sbjct: 57  SVTTADSNGCPTVYSITCNPPDTNPTATVSMMFQDQISGPITGPTLSLTCTDGNWL 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,445,702
Number of Sequences: 27780
Number of extensions: 306149
Number of successful extensions: 807
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)