Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0587
         (624 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.4  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.4  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.6  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.8  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 468 WNWWEILRPN 439
           WNW  +LRPN
Sbjct: 26  WNWNTLLRPN 35


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 468 WNWWEILRPN 439
           WNW  +LRPN
Sbjct: 70  WNWNTLLRPN 79


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 468 WNWWEILRPN 439
           WNW  +LRPN
Sbjct: 70  WNWNTLLRPN 79


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 468 WNWWEILRPN 439
           WNW  +LRPN
Sbjct: 70  WNWNTLLRPN 79


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +1

Query: 304 IGKKLVELGFAKASFPK--ELK-KNTIESQIAPALLSAEAQAKSLRNGIWSEN 453
           IG  L  + F     P   E+K KN    +  PA+L  EAQ +     +W+ N
Sbjct: 761 IGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMN 813


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 371 PLSHKLPLLYYQQKHKQKASETAFG 445
           P+   +P LY+  +  QKA   A G
Sbjct: 159 PMYEVMPHLYFNDEVMQKAYNIAMG 183


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 371 PLSHKLPLLYYQQKHKQKASETAFG 445
           P+   +P LY+  +  QKA   A G
Sbjct: 159 PMYEVMPHLYFNDEVMQKAYNIAMG 183


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 128 PVKLWGIEVVSGNAVNWLECVARGQQVTLKPIGRDN 235
           P+K + I +   +A+ +   + R     +K + RDN
Sbjct: 570 PMKTYNIILKGIDAIEFPRSITRNATALIKKLCRDN 605


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,265
Number of Sequences: 438
Number of extensions: 4203
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)