Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0586
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 1e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 35 0.011
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 33 0.043
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 32 0.057
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 32 0.075
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 31 0.13
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 30 0.23
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 30 0.30
SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 29 0.70
SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 0.93
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 28 0.93
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 28 0.93
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 28 1.2
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 27 2.1
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 3.7
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 3.7
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 26 3.7
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 4.9
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 4.9
SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 26 4.9
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 26 4.9
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 25 6.5
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 25 8.6
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 47.6 bits (108), Expect = 1e-06
Identities = 25/86 (29%), Positives = 48/86 (55%)
Frame = +1
Query: 250 AYAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNL 429
A A++ DVS + ++ ++ + Q P +++N+AG+ D +LS E +D +++ L
Sbjct: 47 ALALQADVSKADQIETAIEKVI-QTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVL 105
Query: 430 KGTFLVMQAFAKAMAESSVTGSIINI 507
+G +L + MA+ GSI+NI
Sbjct: 106 RGNYLTQRYVIPHMAKQGKGGSIVNI 131
Score = 33.9 bits (74), Expect = 0.019
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAAD 175
V GR+ L+TGA GIG+ C++ ++ G V D
Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDRVAGID 36
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 34.7 bits (76), Expect = 0.011
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIK 208
+ G++ALVTG+ GIG L+++GA V A R E + +K
Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMK 84
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 32.7 bits (71), Expect = 0.043
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432
+ ++LD+S+ ++ + Q+ K K + VNS N +L ++ ++S N+
Sbjct: 57 HIIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVL 116
Query: 433 GTFLVMQAF 459
G V QAF
Sbjct: 117 GPIHVYQAF 125
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLS-KEGATVIAADRKYEAAVQ 199
++ + G GIG + + LS +EG V A+ RK EAA +
Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATE 45
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 32.3 bits (70), Expect = 0.057
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432
Y + DV+ K V+ + K + ++ N+ GI + ++ E++ + +NVNL
Sbjct: 73 YTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNN-GICTGKSAIDMTYEEFANEINVNLL 131
Query: 433 GTFLV---------MQAFAKAMAESSVTGSIINI--LALLENTETWG-RQTMRVVTLEWS 576
G F V Q +A +S++G ++N+ NT G Q ++ + +EW
Sbjct: 132 GVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWR 191
Query: 577 R 579
+
Sbjct: 192 K 192
Score = 28.3 bits (60), Expect = 0.93
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGA 157
G+ A+V G GIG A C V ++ GA
Sbjct: 21 GKNAVVFGGARGIGHAICSVFAEAGA 46
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 31.9 bits (69), Expect = 0.075
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 65 SGLVVGRLALVTGAGSGIGRAACQVLSKEGATVI 166
SG + + L+TG SGIG+AA + ++EG+ ++
Sbjct: 37 SGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLV 70
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 31.1 bits (67), Expect = 0.13
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRD-NWMLKLSEEDYDSVLNVNL 429
+ ++LDV++ ++ +D K K + VNS GI++ +LK S+E + S N+
Sbjct: 58 HIIKLDVTSLRSAKDAAMQVEKVVKCIDVLWVNS-GISKSFQPVLKTSDELWMSHYQTNV 116
Query: 430 KGTFLVMQAFAKAMAESSV 486
G V QAF + E +
Sbjct: 117 LGPIHVYQAFYHLLKEGKL 135
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLS-KEGATVIAADRKYEAAVQ 199
++ + G GIG + + LS +EG TV A+ RK EAA +
Sbjct: 6 KVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATE 45
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 29.9 bits (64), Expect = 0.30
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTI 205
++ L+TG+ GIG A + L K+ A VIA R ++T+
Sbjct: 7 KVILLTGSSKGIGLATAEALQKK-AKVIAVSRSLTPELETL 46
>SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 397
Score = 28.7 bits (61), Expect = 0.70
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVI 166
G + +VTG SGIG+ + L+ GA V+
Sbjct: 75 GMVVMVTGGSSGIGQVVVEKLASLGAQVV 103
>SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.3 bits (60), Expect = 0.93
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 62 VSGLVVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYE 187
V G G A+VTGA GIG+ L+ G V+ R E
Sbjct: 51 VYGAKKGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQE 92
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 28.3 bits (60), Expect = 0.93
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKT 211
V G+ A+V G + +GR +L K ATV K E+ ++T
Sbjct: 159 VQGKHAVVIGRSNIVGRPMSILLEKANATVTLCHSKTESIADIVRT 204
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 28.3 bits (60), Expect = 0.93
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432
+ ++LDVS+ ++ + Q+ K + VNSA ++ ++ ++S N+
Sbjct: 57 HIIKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVL 116
Query: 433 GTFLVMQAF 459
G V QAF
Sbjct: 117 GPIHVYQAF 125
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRA-ACQVLSKEGATVIAADRKYEAAVQTIK 208
G+ L+TGA SGIG++ A ++ +I A R++ + K
Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAK 49
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEG 154
R L+TG SG+G+ Q+ S++G
Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKG 25
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/29 (31%), Positives = 21/29 (72%)
Frame = +1
Query: 343 IVNSAGITRDNWMLKLSEEDYDSVLNVNL 429
+V++AG+ + + ++ SE++ DS++ NL
Sbjct: 79 VVHAAGVLQSSLCVRTSEKEIDSIICTNL 107
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 83 RLALVTGAGSG-IGRAACQVLSKEGATVIAADRKYEAAV 196
+ ALVTGAG+G IG + L GA V+ ++ V
Sbjct: 636 KYALVTGAGAGSIGAQIVEGLLAGGAKVVVTTSRFSRKV 674
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 493 NPSLTTRPSLLQMPASLRMYPSSLH*AHYHSLPLRVSASNYP 368
NPSL + + SL PS+ A+ HS L+ SAS+ P
Sbjct: 134 NPSLFSSSNAASQRGSLNTAPSNF--AYSHSSSLQTSASSRP 173
>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 336
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTAL 223
G+L LVTG IG + L + G V R E A + I+ + L
Sbjct: 3 GKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIRLNPGL 50
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 92 LVTGAGSGIGRAACQVLSKEGATVIAADR 178
L+TG+ G+G A +V +G VIA R
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSR 37
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -3
Query: 317 FSV-SCTRSWTALLLETSNSTAY 252
FS+ SC WT+ +ET + T Y
Sbjct: 181 FSIESCNEEWTSTFVETESQTIY 203
>SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 438 ILSDAGICKSDGRVVSDGFYNKY 506
+L D G+C S GR++S G Y
Sbjct: 34 VLQDCGVCDSFGRLLSTGLQCLY 56
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 475 RPSLLQMPASLRMYPSSLH*AHYHSLPLRVSASN 374
R L Q+P +L+ YPS L+ HY +V+ N
Sbjct: 775 RRGLSQLPWALQSYPSPLN-IHYEKFVSKVTIEN 807
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 561 YYSHSLSAPCFRIFQQC*DIYYRTR 487
++ + LSAP +F C +YY+T+
Sbjct: 515 FFENYLSAPVILVFFICHKLYYKTK 539
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 92 LVTGAGSGIGRAACQVLSKEGATVIAADR 178
LVTG G+G+A + L GA V R
Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVAR 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,659,485
Number of Sequences: 5004
Number of extensions: 55397
Number of successful extensions: 173
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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