BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0586 (613 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 48 1e-06 SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 35 0.011 SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 33 0.043 SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 32 0.057 SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 32 0.075 SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 31 0.13 SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 30 0.23 SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 30 0.30 SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pom... 29 0.70 SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||M... 28 0.93 SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 28 0.93 SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 28 0.93 SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 28 1.2 SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 27 2.1 SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 26 3.7 SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 26 3.7 SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|... 26 3.7 SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 4.9 SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 26 4.9 SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomy... 26 4.9 SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 26 4.9 SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 25 6.5 SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 25 8.6 >SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pombe|chr 1|||Manual Length = 258 Score = 47.6 bits (108), Expect = 1e-06 Identities = 25/86 (29%), Positives = 48/86 (55%) Frame = +1 Query: 250 AYAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNL 429 A A++ DVS + ++ ++ + Q P +++N+AG+ D +LS E +D +++ L Sbjct: 47 ALALQADVSKADQIETAIEKVI-QTLGPIDVLINNAGLADDTPFEQLSHESWDHDVSLVL 105 Query: 430 KGTFLVMQAFAKAMAESSVTGSIINI 507 +G +L + MA+ GSI+NI Sbjct: 106 RGNYLTQRYVIPHMAKQGKGGSIVNI 131 Score = 33.9 bits (74), Expect = 0.019 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAAD 175 V GR+ L+TGA GIG+ C++ ++ G V D Sbjct: 3 VEGRVVLITGAAGGIGKVLCKMFTELGDRVAGID 36 >SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual Length = 339 Score = 34.7 bits (76), Expect = 0.011 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +2 Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIK 208 + G++ALVTG+ GIG L+++GA V A R E + +K Sbjct: 40 LTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMK 84 >SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 253 Score = 32.7 bits (71), Expect = 0.043 Identities = 18/69 (26%), Positives = 34/69 (49%) Frame = +1 Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432 + ++LD+S+ ++ + Q+ K K + VNS N +L ++ ++S N+ Sbjct: 57 HIIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVL 116 Query: 433 GTFLVMQAF 459 G V QAF Sbjct: 117 GPIHVYQAF 125 Score = 28.7 bits (61), Expect = 0.70 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 83 RLALVTGAGSGIGRAACQVLS-KEGATVIAADRKYEAAVQ 199 ++ + G GIG + + LS +EG V A+ RK EAA + Sbjct: 6 KIYFIAGGNRGIGLSLVKELSNREGTVVFASARKPEAATE 45 >SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 261 Score = 32.3 bits (70), Expect = 0.057 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%) Frame = +1 Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432 Y + DV+ K V+ + K + ++ N+ GI + ++ E++ + +NVNL Sbjct: 73 YTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNN-GICTGKSAIDMTYEEFANEINVNLL 131 Query: 433 GTFLV---------MQAFAKAMAESSVTGSIINI--LALLENTETWG-RQTMRVVTLEWS 576 G F V Q +A +S++G ++N+ NT G Q ++ + +EW Sbjct: 132 GVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWR 191 Query: 577 R 579 + Sbjct: 192 K 192 Score = 28.3 bits (60), Expect = 0.93 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +2 Query: 80 GRLALVTGAGSGIGRAACQVLSKEGA 157 G+ A+V G GIG A C V ++ GA Sbjct: 21 GKNAVVFGGARGIGHAICSVFAEAGA 46 >SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 286 Score = 31.9 bits (69), Expect = 0.075 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +2 Query: 65 SGLVVGRLALVTGAGSGIGRAACQVLSKEGATVI 166 SG + + L+TG SGIG+AA + ++EG+ ++ Sbjct: 37 SGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLV 70 >SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 254 Score = 31.1 bits (67), Expect = 0.13 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRD-NWMLKLSEEDYDSVLNVNL 429 + ++LDV++ ++ +D K K + VNS GI++ +LK S+E + S N+ Sbjct: 58 HIIKLDVTSLRSAKDAAMQVEKVVKCIDVLWVNS-GISKSFQPVLKTSDELWMSHYQTNV 116 Query: 430 KGTFLVMQAFAKAMAESSV 486 G V QAF + E + Sbjct: 117 LGPIHVYQAFYHLLKEGKL 135 >SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 253 Score = 30.3 bits (65), Expect = 0.23 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = +2 Query: 83 RLALVTGAGSGIGRAACQVLS-KEGATVIAADRKYEAAVQ 199 ++ + G GIG + + LS +EG TV A+ RK EAA + Sbjct: 6 KVYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATE 45 >SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pombe|chr 2|||Manual Length = 247 Score = 29.9 bits (64), Expect = 0.30 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +2 Query: 83 RLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTI 205 ++ L+TG+ GIG A + L K+ A VIA R ++T+ Sbjct: 7 KVILLTGSSKGIGLATAEALQKK-AKVIAVSRSLTPELETL 46 >SPAC19A8.06 |||short chain dehydrogenase|Schizosaccharomyces pombe|chr 1|||Manual Length = 397 Score = 28.7 bits (61), Expect = 0.70 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVI 166 G + +VTG SGIG+ + L+ GA V+ Sbjct: 75 GMVVMVTGGSSGIGQVVVEKLASLGAQVV 103 >SPAC4G9.15 |||ketoreductase |Schizosaccharomyces pombe|chr 1|||Manual Length = 341 Score = 28.3 bits (60), Expect = 0.93 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = +2 Query: 62 VSGLVVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYE 187 V G G A+VTGA GIG+ L+ G V+ R E Sbjct: 51 VYGAKKGYWAVVTGATDGIGKEYATQLAMSGFNVVLISRTQE 92 >SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces pombe|chr 2|||Manual Length = 937 Score = 28.3 bits (60), Expect = 0.93 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = +2 Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKT 211 V G+ A+V G + +GR +L K ATV K E+ ++T Sbjct: 159 VQGKHAVVIGRSNIVGRPMSILLEKANATVTLCHSKTESIADIVRT 204 >SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 253 Score = 28.3 bits (60), Expect = 0.93 Identities = 17/69 (24%), Positives = 33/69 (47%) Frame = +1 Query: 253 YAVELDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLK 432 + ++LDVS+ ++ + Q+ K + VNSA ++ ++ ++S N+ Sbjct: 57 HIIKLDVSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVL 116 Query: 433 GTFLVMQAF 459 G V QAF Sbjct: 117 GPIHVYQAF 125 >SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 259 Score = 27.9 bits (59), Expect = 1.2 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +2 Query: 80 GRLALVTGAGSGIGRA-ACQVLSKEGATVIAADRKYEAAVQTIK 208 G+ L+TGA SGIG++ A ++ +I A R++ + K Sbjct: 6 GKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAK 49 >SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 236 Score = 27.1 bits (57), Expect = 2.1 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = +2 Query: 83 RLALVTGAGSGIGRAACQVLSKEG 154 R L+TG SG+G+ Q+ S++G Sbjct: 2 RKVLITGGSSGLGKRIAQIWSQKG 25 Score = 26.2 bits (55), Expect = 3.7 Identities = 9/29 (31%), Positives = 21/29 (72%) Frame = +1 Query: 343 IVNSAGITRDNWMLKLSEEDYDSVLNVNL 429 +V++AG+ + + ++ SE++ DS++ NL Sbjct: 79 VVHAAGVLQSSLCVRTSEKEIDSIICTNL 107 >SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1842 Score = 26.2 bits (55), Expect = 3.7 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +2 Query: 83 RLALVTGAGSG-IGRAACQVLSKEGATVIAADRKYEAAV 196 + ALVTGAG+G IG + L GA V+ ++ V Sbjct: 636 KYALVTGAGAGSIGAQIVEGLLAGGAKVVVTTSRFSRKV 674 >SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr 1|||Manual Length = 474 Score = 26.2 bits (55), Expect = 3.7 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -1 Query: 493 NPSLTTRPSLLQMPASLRMYPSSLH*AHYHSLPLRVSASNYP 368 NPSL + + SL PS+ A+ HS L+ SAS+ P Sbjct: 134 NPSLFSSSNAASQRGSLNTAPSNF--AYSHSSSLQTSASSRP 173 >SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|Schizosaccharomyces pombe|chr 1|||Manual Length = 336 Score = 26.2 bits (55), Expect = 3.7 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +2 Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTAL 223 G+L LVTG IG + L + G V R E A + I+ + L Sbjct: 3 GKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIRLNPGL 50 >SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 3|||Manual Length = 292 Score = 25.8 bits (54), Expect = 4.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 92 LVTGAGSGIGRAACQVLSKEGATVIAADR 178 L+TG+ G+G A +V +G VIA R Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSR 37 >SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces pombe|chr 2|||Manual Length = 3131 Score = 25.8 bits (54), Expect = 4.9 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%) Frame = -3 Query: 317 FSV-SCTRSWTALLLETSNSTAY 252 FS+ SC WT+ +ET + T Y Sbjct: 181 FSIESCNEEWTSTFVETESQTIY 203 >SPAC1687.18c |ssl3||cohesin loading factor Ssl3|Schizosaccharomyces pombe|chr 1|||Manual Length = 559 Score = 25.8 bits (54), Expect = 4.9 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +3 Query: 438 ILSDAGICKSDGRVVSDGFYNKY 506 +L D G+C S GR++S G Y Sbjct: 34 VLQDCGVCDSFGRLLSTGLQCLY 56 >SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1273 Score = 25.8 bits (54), Expect = 4.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -1 Query: 475 RPSLLQMPASLRMYPSSLH*AHYHSLPLRVSASN 374 R L Q+P +L+ YPS L+ HY +V+ N Sbjct: 775 RRGLSQLPWALQSYPSPLN-IHYEKFVSKVTIEN 807 >SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces pombe|chr 2|||Manual Length = 585 Score = 25.4 bits (53), Expect = 6.5 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -2 Query: 561 YYSHSLSAPCFRIFQQC*DIYYRTR 487 ++ + LSAP +F C +YY+T+ Sbjct: 515 FFENYLSAPVILVFFICHKLYYKTK 539 >SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual Length = 503 Score = 25.0 bits (52), Expect = 8.6 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 92 LVTGAGSGIGRAACQVLSKEGATVIAADR 178 LVTG G+G+A + L GA V R Sbjct: 26 LVTGGSQGLGKAIAKELVLRGANVTIVAR 54 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,659,485 Number of Sequences: 5004 Number of extensions: 55397 Number of successful extensions: 173 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 163 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 172 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 267622334 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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