Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0586
(613 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 68 7e-12
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 52 3e-07
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 48 8e-06
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 46 2e-05
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 39 0.004
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 38 0.006
SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017) 37 0.011
SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 37 0.015
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 37 0.015
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 36 0.026
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05) 33 0.18
SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021) 33 0.18
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 32 0.32
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 31 0.56
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 31 0.74
SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06) 31 0.97
SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 1.3
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 30 1.3
SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 30 1.3
SB_49030| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 30 1.7
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34269| Best HMM Match : IncA (HMM E-Value=2.4) 30 1.7
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 29 2.2
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 5.2
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05) 28 6.9
SB_49376| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_45996| Best HMM Match : VWA (HMM E-Value=2.6e-12) 27 9.1
SB_38056| Best HMM Match : OAD_gamma (HMM E-Value=8) 27 9.1
SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17) 27 9.1
SB_48060| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +1
Query: 265 LDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFL 444
++V++S V+DL+Q K+Y++ PCI+VNSAGI +D +LK+ E+D+D V++VNLK +
Sbjct: 251 VNVASSSEVKDLLQAIHKEYQRAPCILVNSAGIAKDALLLKMKEQDFDDVIDVNLKHVRV 310
Query: 445 VMQAFAKAMAESSVTGSIINIL 510
+ + + GSII L
Sbjct: 311 I--GGTSVSLDHWIVGSIIRKL 330
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 62 VSGLVVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQT 202
V GL+ GRLALVTG GSGIGRA C+ L+ GA+V D A +T
Sbjct: 187 VGGLLRGRLALVTGGGSGIGRAVCEALANRGASVSVIDLHGVGAKET 233
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 480 VSDGFYNKYLSIVGKYGNMGQTNYASSNAGVVAMTQSAAKEL 605
+++G SIV K GNMGQ NYA+S AGV +T+ A EL
Sbjct: 398 INNGSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIEL 439
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 430 KGTFLVMQAFAKAMAESSV-TGSIINILALLENTETWGR 543
KGTFL+ Q AKAM E+ + GSIINI +++ + G+
Sbjct: 380 KGTFLMCQTTAKAMVENKINNGSIINISSIVAKSGNMGQ 418
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 52.4 bits (120), Expect = 3e-07
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 265 LDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWML-KLSEEDYDSVLNVNLKGTF 441
+D+SN +AV+ Q + + P +++N++G+T N ++ E+++ V+++N+KGT
Sbjct: 63 VDISNDEAVKQWSQQVMLDFGAPS-LLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTA 121
Query: 442 LVMQAFAKAMAESSVTGSIINILALLENTETWGR 543
V++ F +M E+ G I+N T WGR
Sbjct: 122 NVLRHFLPSMIEAKRKGVIVNF------TSGWGR 149
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +1
Query: 268 DVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFLV 447
D ++ + +V+ +K + + ++VN+AGI RD +L++SE D+D V V+LKG+FLV
Sbjct: 73 DYNSVEQGDQVVETAIKAFGRID-VVVNNAGILRDKSILRMSELDWDLVQRVHLKGSFLV 131
Query: 448 MQA 456
+A
Sbjct: 132 TRA 134
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAAD 175
GR+ LVTGAG+G+GR ++ GA+V+ D
Sbjct: 10 GRVVLVTGAGNGLGRQYALAFAERGASVVVND 41
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 510 SIVGKYGNMGQTNYASSNAGVVAMTQSAAKE 602
S G YGN GQ NY+++ G+V ++ + A+E
Sbjct: 152 STSGIYGNFGQANYSAAKLGLVGLSNTLAQE 182
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/81 (29%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +1
Query: 265 LDVSNSKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWML-KLSEEDYDSVLNVNLKGTF 441
+D+++ V++ + K + PP ++N+AG N L +++ E++D V++VNLKG+
Sbjct: 58 VDITDDSVVKEWATNVCKSFG-PPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSA 116
Query: 442 LVMQAFAKAMAESSVTGSIIN 504
V+++F M ++ G I+N
Sbjct: 117 NVIRSFLPKMIKAG-KGVIVN 136
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 77 VGRLALVTGAGSGIGRAACQVLSKEGATVIAADR 178
+G++ +TG +G+G A + S +G TV+ R
Sbjct: 1 MGKIVAITGVSTGLGLALTKWFSSQGHTVVGCGR 34
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 62 VSGLVVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQ 199
+ G GR+A+VTG SGIG+A + L++EGA+V D E Q
Sbjct: 18 LEGRFHGRVAIVTGGASGIGKATVERLAREGASVAILDINDELGQQ 63
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAA 193
G+ +VTGA SGIG+A L++ GA VI A R E+A
Sbjct: 68 GKTVIVTGANSGIGKATALELARRGARVIMACRDLESA 105
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 340 IIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFLVMQAFAKAMAESSVTGSIINILALL 519
++VN+AG L ++ +++ + V++ G FL Q A+ M + G IINI ++
Sbjct: 119 VLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVH 178
Query: 520 ENT 528
E+T
Sbjct: 179 EHT 181
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAA 193
GR+ +VTGA SGIG A L+ GA V+ A R E A
Sbjct: 45 GRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKA 82
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAA 193
GR+ +VTGA SGIG A L+ GA V+ A R E A
Sbjct: 93 GRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKA 130
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQ 199
G++A+VTGA SGIG A + L++ G V A R+ E Q
Sbjct: 104 GQVAIVTGASSGIGAAVAKALAEAGVKVALAARREERLTQ 143
>SB_26979| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=0.017)
Length = 453
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAA 193
G++ LVTGA GIG+ +L K GATV R ++A
Sbjct: 52 GKVCLVTGASRGIGKGIALMLGKAGATVYVTGRTLQSA 89
>SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLK-QYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNL 429
+ +EL+V++ +A+Q + T + +K I+VN+AGI +L ++EE V N
Sbjct: 61 HLLELEVTDFQAIQRCAEQTREIVQEKGLHILVNNAGILDPAGLLDVTEEQMIRVFKANT 120
Query: 430 KGTFLVMQAFAKAMAESSVTGS 495
++QAF + + T S
Sbjct: 121 VAPLQIVQAFLPLLKQGGKTAS 142
>SB_24642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 253 YAVELDVSNSKAVQDLVQDTLKQYK-KPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNL 429
+ +EL+V++ +A+Q Q T + + K I++N+AGI +L ++EE V N
Sbjct: 61 HLLELEVTDFQAIQRCAQQTREIVQDKGLHILMNNAGIVDPAGLLDVTEEQMIRVFKANT 120
Query: 430 KGTFLVMQAFAKAMAESSVTGS 495
++QAF + + T S
Sbjct: 121 VAPLQIVQAFLPLLKQGGKTAS 142
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 86 LALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTAL 223
+ L+TGAGSGIG+ +K GA ++ D +A QT++ +L
Sbjct: 55 IVLITGAGSGIGKGMAIEFAKIGAKIVCVDINKQANDQTVEVIKSL 100
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 68 GLVVGRLALVTGAGSGIGRAACQVLSKEGATVIAADR 178
GL G++A+VTG G+GIG+A L G+ V+ A R
Sbjct: 12 GLFDGKVAIVTGGGTGIGKAIAAELLSLGSKVVIASR 48
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +1
Query: 280 SKAVQDLVQDTLKQYKKPPCIIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFL-VMQA 456
S V +L++ TL Y + ++ N G + +S + +++V++ NL GTFL +A
Sbjct: 99 SLKVTNLMKSTLSSYGRIDYLVNNGGGQFLCP-VSNMSYKGWNAVIDTNLNGTFLCCTEA 157
Query: 457 FAKAMAESSVTGSIINIL 510
+ M+E GSI+NI+
Sbjct: 158 YRLWMSEHG--GSIVNII 173
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEA 190
G L+TGA SGIGR +L+K+G ++ D EA
Sbjct: 35 GETVLITGAASGIGRLTALILAKKGCKLVLWDINLEA 71
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 74 VVGRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEA 190
+ G+ +TGA GIG+A ++++GA V+ A + EA
Sbjct: 3 LAGKTVFITGASRGIGKAIAVKVARDGANVVIAAKTAEA 41
>SB_21622| Best HMM Match : adh_short (HMM E-Value=3.1e-05)
Length = 493
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATV 163
R ++TGA SGIG+ + L+K GATV
Sbjct: 44 RSFMITGANSGIGKETARALAKSGATV 70
>SB_35940| Best HMM Match : adh_short (HMM E-Value=0.00021)
Length = 181
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATV 163
R ++TGA SGIG+ + L+K GATV
Sbjct: 44 RSFMITGANSGIGKETARALAKSGATV 70
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYE---AAVQTIK 208
G+ ++TGA +GIG+ L+K GA VI R + AAV+ I+
Sbjct: 37 GKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQ 82
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 31.5 bits (68), Expect = 0.56
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYE 187
G+ ++TGA +GIG+ L+K GA VI R +
Sbjct: 37 GKTVIITGATTGIGKETAVDLAKRGARVIIGARNLD 72
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 331 PPCI--IVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFLVMQAFAKAMAESSVTGSIIN 504
P C+ +VN+AG+ + ++ E+Y + VNL GT + +AF + G ++N
Sbjct: 35 PDCLWGLVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVN 92
Query: 505 I 507
I
Sbjct: 93 I 93
>SB_38785| Best HMM Match : adh_short (HMM E-Value=2.4e-06)
Length = 267
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 489 GFYNKYLSIVGKYGNMGQTNYASSNAGVVAMTQSAAKEL 605
G S+ G MGQ Y++S G+V MT A++L
Sbjct: 154 GVITNTASVAAFDGQMGQAAYSASKGGIVGMTLPIARDL 192
>SB_56804| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 345
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 580 IATTPALLLA*FVCPMFPYFPTMLRYLL*NPSLTTRPSLLQM 455
I T A+++ FV P+F ++R+ L +P TT P+L+ +
Sbjct: 235 ITKTLAVVIGAFVVCWAPFFTIIIRFALCSPHCTTDPALISV 276
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEG 154
++A++TG SGIG A +L+K+G
Sbjct: 4 KVAVITGCSSGIGLATASILAKDG 27
>SB_14258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 44 IIQDNMVSGLVVGRLALVTGAGSGIGRAACQVLSKEGA-TVIAADRKYE 187
II N S + G++A +TGA SGIG L+ G V++A RK E
Sbjct: 40 IIGHNPTSAMQ-GKVAWITGASSGIGEFLAYQLAGNGCKLVLSARRKQE 87
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +2
Query: 86 LALVTGAGSGIGRAACQVLSKEGATVIAAD---RKYEAAVQTIKTHTALAPG 232
+AL+ G SGIGRA L + GA + D + + Q +H PG
Sbjct: 290 VALIAGGASGIGRATAIRLIRAGARAVIVDLPSSEGQNTAQEFGSHCTFIPG 341
>SB_49030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 71 LVVGRLALVTGAGSGIGRAACQVLSK 148
L+ G++A VTG GSGIG +VL +
Sbjct: 22 LLAGKVAFVTGGGSGIGFTITEVLMR 47
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTALAP 229
G++ +TGA SGIG +K G+ ++ + R+ E ++ +K + P
Sbjct: 870 GKVVWITGASSGIGEHLAYEFTKHGSKLVLSARR-EKRLEQVKNNCLAFP 918
>SB_5494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 580 IATTPALLLA*FVCPMFPYFPTMLRYLL*NPSLTTRPSLLQM 455
I T A+++ FV P+F ++R+ L +P TT P+L+ +
Sbjct: 235 ITKTLAVVIGAFVVCWAPFFTIIIRFALCSPHCTTDPALISV 276
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTALAPGTN 238
GR+ +TGA SGIG L+K G ++ + R+ + + A+A N
Sbjct: 42 GRVCWITGASSGIGENLAYELAKFGCKLVLSARRRSELERVKEQCIAIAKEAN 94
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATVIAAD 175
++ +++ A GIG+A ++EGA VIA D
Sbjct: 17 KVVVLSAAAQGIGKATALACAREGAKVIATD 47
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +1
Query: 340 IIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFLVMQAFAKAMAESSVTGSIINILAL 516
++ N AG+ + + SE+ +D +++N+K F + + M + +GSIIN+ ++
Sbjct: 87 VLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKMRQQG-SGSIINMASV 144
>SB_34269| Best HMM Match : IncA (HMM E-Value=2.4)
Length = 176
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 77 VGRLALVTGAGSGI-GRAACQVLSKEGATVIAADRKYEAAVQTIKTHTALAPGTNGGEEH 253
V L V GAG+G+ R ++K TV+ +Y A I+ LAP E
Sbjct: 67 VAGLVGVVGAGAGVVSRGLTSKVAKHEDTVVLEQERYNALKAAIRARHGLAPHDKKKRER 126
Query: 254 ML 259
L
Sbjct: 127 AL 128
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATVIAADRKYEAAVQTIKTHTALAPG 232
++ L+TGA GIG A ++ + +G + ++ +AA + + + A G
Sbjct: 8 KVMLITGASRGIGAATARLAAAQGYALCLNYQRQQAAAEALVSEITQAGG 57
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 340 IIVNSAGITRDNWMLKLSEEDYDSVLNVNLKGTFLVMQAFAKAMAESSVTGSIINI 507
I+VN+AGI +L ++ + +NL F ++F M E + G I+ I
Sbjct: 1302 ILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHFWTSRSFLGRMLEQN-QGHIVTI 1356
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 80 GRLALVTGAGSGIGRAACQVLSKEGATVIAADR 178
G+ ++TGA SGIG + L+ A VI A R
Sbjct: 72 GKTVIITGANSGIGMEVARDLAWRKARVIMACR 104
>SB_5208| Best HMM Match : adh_short (HMM E-Value=1.1e-05)
Length = 233
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 83 RLALVTGAGSGIGRAACQVLSKEGATVIAADR 178
+ L+TG+ SG+GR L K G V+A R
Sbjct: 42 KFVLITGSSSGMGRETAIALDKLGFHVLATCR 73
>SB_49376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 551 IVCLPHVSVFSNNAKIFIIEPVTDDSAIAFANACITKNVP 432
I CL H+SV + F E T A+AFA+ + P
Sbjct: 119 IECLTHLSVLLGDKDFFFGESPTTLDAVAFAHLALIWRAP 158
>SB_45996| Best HMM Match : VWA (HMM E-Value=2.6e-12)
Length = 595
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 193 CTNYKNSYSISTXXXXXXGAYAVELDVSNSKAVQDLVQDTLKQYKK 330
CT K S+ + T A A E+D S++K +++ + D ++ + +
Sbjct: 347 CTQVKCSWLLPTYVSNVTYARAKEIDFSSAKKLKEKLDDNIESFNE 392
>SB_38056| Best HMM Match : OAD_gamma (HMM E-Value=8)
Length = 176
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 120 PIPEPAPVTRARRPTTKPDTILSCIIQ 40
P P PV R+ TT+P + +CI Q
Sbjct: 42 PSTRPTPVPRSNPTTTRPPHVAACIPQ 68
>SB_25624| Best HMM Match : PHD (HMM E-Value=1.3e-17)
Length = 1828
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +1
Query: 193 CTNYKNSYSISTXXXXXXGAYAVELDVSNSKAVQDLVQDTLKQYKK 330
CT K S+ + T A A E+D S++K +++ + D ++ + +
Sbjct: 1244 CTQVKCSWLLPTYVSNVTYARAKEIDFSSAKKLKEKLDDNIESFNE 1289
>SB_48060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 551 IVCLPHVSVFSNNAKIFIIEPVTDDSAIAFANACITKNVP 432
I CL H+SV + F E T A+AFA+ + P
Sbjct: 119 IECLTHLSVLLGDKDFFFGESPTTLDAVAFAHLALIWRAP 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,236,736
Number of Sequences: 59808
Number of extensions: 429708
Number of successful extensions: 1184
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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