Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0583
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 136 6e-32
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 136 6e-32
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 136 6e-32
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 136 6e-32
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 128 2e-29
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 72 2e-12
AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptas... 31 2.7
CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein. 31 4.7
BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying pro... 31 4.7
AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein. 31 4.7
AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens ... 31 4.7
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 136 bits (329), Expect = 6e-32
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +1
Query: 37 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 216
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 217 TRIIDVVYNASN 252
TRIIDVVYNASN
Sbjct: 76 TRIIDVVYNASN 87
Score = 128 bits (309), Expect = 2e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 434
ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +K
Sbjct: 89 ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148
Query: 435 YLARQRLAKVEGALEEQFHTGRLLA 509
Y R++ AK+ LEEQF G+LLA
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLA 173
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 174 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 136 bits (329), Expect = 6e-32
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +1
Query: 37 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 216
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 217 TRIIDVVYNASN 252
TRIIDVVYNASN
Sbjct: 76 TRIIDVVYNASN 87
Score = 128 bits (309), Expect = 2e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 434
ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +K
Sbjct: 89 ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148
Query: 435 YLARQRLAKVEGALEEQFHTGRLLA 509
Y R++ AK+ LEEQF G+LLA
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLA 173
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 174 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 136 bits (329), Expect = 6e-32
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +1
Query: 37 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 216
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 217 TRIIDVVYNASN 252
TRIIDVVYNASN
Sbjct: 76 TRIIDVVYNASN 87
Score = 128 bits (309), Expect = 2e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 434
ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +K
Sbjct: 89 ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148
Query: 435 YLARQRLAKVEGALEEQFHTGRLLA 509
Y R++ AK+ LEEQF G+LLA
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLA 173
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 174 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 136 bits (329), Expect = 6e-32
Identities = 61/72 (84%), Positives = 65/72 (90%)
Frame = +1
Query: 37 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 216
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 217 TRIIDVVYNASN 252
TRIIDVVYNASN
Sbjct: 76 TRIIDVVYNASN 87
Score = 128 bits (309), Expect = 2e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 434
ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +K
Sbjct: 89 ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 148
Query: 435 YLARQRLAKVEGALEEQFHTGRLLA 509
Y R++ AK+ LEEQF G+LLA
Sbjct: 149 YDERKKNAKISSLLEEQFQQGKLLA 173
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 174 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 128 bits (309), Expect = 2e-29
Identities = 59/85 (69%), Positives = 70/85 (82%)
Frame = +3
Query: 255 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 434
ELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +K
Sbjct: 69 ELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKK 128
Query: 435 YLARQRLAKVEGALEEQFHTGRLLA 509
Y R++ AK+ LEEQF G+LLA
Sbjct: 129 YDERKKNAKISSLLEEQFQQGKLLA 153
Score = 76.2 bits (179), Expect = 9e-14
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +1
Query: 37 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 216
GKR P KKRKYELGRPAANT++GP+RIH+VR RGG C TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG-------------------C-TRK 55
Query: 217 TRIIDVVYNASN 252
TRIIDVVYNASN
Sbjct: 56 TRIIDVVYNASN 67
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 154 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 72.1 bits (169), Expect = 2e-12
Identities = 29/35 (82%), Positives = 34/35 (97%)
Frame = +2
Query: 509 CVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 613
C+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 46 CIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 80
Score = 52.4 bits (120), Expect = 1e-06
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +3
Query: 375 LTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLA 509
LT EE I+NKKRS+K +KY R++ AK+ LEEQF G+LLA
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLA 45
>AB016767-1|BAA74724.1| 523|Homo sapiens telomerase transcriptase
protein.
Length = 523
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 221 RVLRVEHSDPQEKLPVSRRSARYLVFPPRERTE----WIR*GPSLVFAAGRPNSYFLFLR 54
R R E PQ+ + V RS R L PPR RT+ W S AG + LR
Sbjct: 411 RTARCELRSPQQPVSVPGRSPRALWRPPRRRTQTPVAWCSCSASTAPLAG------VRLR 464
Query: 53 MGARFPAGGP 24
G PAG P
Sbjct: 465 AGLPAPAGAP 474
>CR457284-1|CAG33565.1| 201|Homo sapiens FLJ11749 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 500
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>BC010108-1|AAH10108.1| 201|Homo sapiens chromatin modifying
protein 6 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 500
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AY329087-1|AAQ91196.1| 201|Homo sapiens VPS20 protein.
Length = 201
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 500
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
>AK021811-1|BAB13901.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ11749 fis, clone HEMBA1005558, weakly similar to
NUCLEAR PROTEIN SNF7. ).
Length = 201
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 354 GRKKGAKLTEAEEAIINKKRSQKTARKYLAR--QRLAKVEGALEEQFHTGR 500
GRKK +++TE ++AI+ K+ + R+Y R Q+L + + GR
Sbjct: 6 GRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGR 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,043,666
Number of Sequences: 237096
Number of extensions: 1953770
Number of successful extensions: 4586
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4582
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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