Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0582
         (660 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IK08 Cluster: Putative uncharacterized protein; n=1; ...    36   0.65 
UniRef50_Q8LNQ4 Cluster: Putative glycopeptide; n=1; Oryza sativ...    33   4.6  
UniRef50_Q23Q68 Cluster: Putative uncharacterized protein; n=2; ...    33   8.0  

>UniRef50_Q8IK08 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1425

 Score = 36.3 bits (80), Expect = 0.65
 Identities = 19/51 (37%), Positives = 27/51 (52%)
 Frame = -2

Query: 641  YLYEHNTKSFNNENYLLLKNVNDKQNILFFAHYIICRRLG*VKVCEAHFSH 489
            Y+ +HN +  N+EN +   N N     +FF HYII  ++  VK    HF H
Sbjct: 1335 YINQHNQQQNNDENDIQTYNTNFYDYYIFFQHYIIKNKIKYVK----HFPH 1381


>UniRef50_Q8LNQ4 Cluster: Putative glycopeptide; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Putative glycopeptide -
           Oryza sativa subsp. japonica (Rice)
          Length = 205

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -1

Query: 87  RPRAFRASRLTLLKPMPPPATR 22
           R RA+ A+R +LL P+PPPATR
Sbjct: 171 RSRAYAAARRSLLCPLPPPATR 192


>UniRef50_Q23Q68 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 382

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 23/83 (27%), Positives = 36/83 (43%)
 Frame = +3

Query: 60  ILRPETRAAEDLLQRTNLGTINTYLLYNSSLKHSPGCVTCVNETTNRISRSKI*YFSYID 239
           +L  +  +  +L+ R     +  Y   N   +     V  + E  N    S I     ID
Sbjct: 215 LLGSDLESYYNLIMRQGFFEVTNYTKRNEQTQEFIDIVKTLFE--NNFDMSSIMVSDNID 272

Query: 240 ILHLQRKKLTEKII*YMYICYGK 308
           IL L   K+T KI+  ++ICYG+
Sbjct: 273 ILTLDGIKITAKIVPQIHICYGQ 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 639,226,754
Number of Sequences: 1657284
Number of extensions: 12950377
Number of successful extensions: 32153
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32122
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)