Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0582
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060405-1|AAL25444.1|  244|Drosophila melanogaster LD33016p pro...    29   4.2  
BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p pro...    29   5.6  
AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-P...    29   5.6  
AE014296-2368|AAN11805.1|  238|Drosophila melanogaster CG32141-P...    29   5.6  

>AY060405-1|AAL25444.1|  244|Drosophila melanogaster LD33016p
           protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -1

Query: 153 STRSCKVNTYLSSPDLYVVGDPRPRAFRASRLTLLKPMPPP 31
           S RSC   + L      VV DP P++     L LL+P P P
Sbjct: 3   SRRSCSRLSKLYEDCSCVVNDPAPKSAAQRLLNLLQPTPEP 43


>BT001662-1|AAN71417.1|  181|Drosophila melanogaster RE47391p
           protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 345 LPENVYICRNIYFYRNIYTYI 283
           L + VYIC ++Y Y  IYTY+
Sbjct: 18  LKKRVYICIHLYIYIYIYTYL 38


>AE014297-1159|AAN13476.1|  181|Drosophila melanogaster CG31394-PA
           protein.
          Length = 181

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 345 LPENVYICRNIYFYRNIYTYI 283
           L + VYIC ++Y Y  IYTY+
Sbjct: 18  LKKRVYICIHLYIYIYIYTYL 38


>AE014296-2368|AAN11805.1|  238|Drosophila melanogaster CG32141-PA
           protein.
          Length = 238

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +2

Query: 41  IGFNNVNLEARNARGRGSPTTYKSG 115
           I  NNV++E RN R R SP+  K+G
Sbjct: 211 IAENNVSVENRNMRKRSSPSNTKTG 235


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,138,765
Number of Sequences: 53049
Number of extensions: 617202
Number of successful extensions: 1193
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)