Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0582
         (660 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    25   0.48 
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    25   0.64 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    25   0.64 
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.0  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.0  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   7.9  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   7.9  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   7.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   7.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   7.9  

>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENYLLLKNVNDKQ 567
           N Y Y +N  ++NN NY    N N K+
Sbjct: 327 NNYKYNYNNNNYNNNNYNNNYNNNCKK 353


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENY 597
           N Y Y +N  ++NN NY
Sbjct: 92  NNYKYNYNNNNYNNNNY 108


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENY 597
           N Y Y +N  ++NN NY
Sbjct: 92  NNYKYNYNNNNYNNNNY 108


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENYLLLKNVN 576
           N Y Y +N  ++NN    L  N+N
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENYLLLKNVN 576
           N Y Y +N  ++NN    L  N+N
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENYLLLKNVN 576
           N Y Y +N  ++NN    L  N+N
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNIN 117


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 647 NIYLYEHNTKSFNNENYLLLKNVN 576
           N Y Y +N  ++NN    L  N+N
Sbjct: 94  NNYKYNYNNNNYNNNCKKLYYNIN 117


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 647 NIYLYEH--NTKSFNNENYLLLKNVNDKQNILFFAHYII 537
           N Y Y +  N  ++NN NY    N N K   L++ +YII
Sbjct: 320 NNYKYSNYNNYNNYNNNNY---NNYNKK---LYYKNYII 352


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 27  SLVAASASTTSILRPETRAAEDLLQRTNLGTINTYLLYNSSL 152
           SL+ + A + S+ R   R A DL    N   +NT     SSL
Sbjct: 9   SLLGSIARSLSLDRRARRGAADLSLAGNATKVNTVHEEESSL 50


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 177 CVNETTNRISRSKI 218
           CV+  +NRISR+++
Sbjct: 32  CVSRISNRISRNRV 45


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 629 HNTKSFNNENY 597
           HN  ++NN NY
Sbjct: 91  HNNNNYNNNNY 101


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 629 HNTKSFNNENY 597
           HN  ++NN NY
Sbjct: 91  HNNNNYNNNNY 101


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 629 HNTKSFNNENY 597
           HN  ++NN NY
Sbjct: 324 HNNNNYNNNNY 334


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 283 NICIYVTVKVDIAANVHIF 339
           N+CI   VKV  AA+  +F
Sbjct: 166 NVCIAAAVKVPSAADDRMF 184


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 283 NICIYVTVKVDIAANVHIF 339
           N+CI   VKV  AA+  +F
Sbjct: 256 NVCIAAAVKVPSAADDRMF 274


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,518
Number of Sequences: 438
Number of extensions: 4435
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)