Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0580
         (772 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   4.7  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 112 VAVRLMEE*FFGAEHGTRVVLNL 44
           +AVRL    FFGA HG   +  L
Sbjct: 170 LAVRLSAANFFGARHGLETLNQL 192


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 676 SMYRSTLSWCFFKYIFDIVYI 614
           S+ +    +C+F Y+F + YI
Sbjct: 139 SLLQLVFVFCYFIYLFTVYYI 159


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 328 AQSKATKQTQPTSQLSQMMLSL 393
           AQ++ +   QP+S ++ ++LSL
Sbjct: 76  AQNQPSSYKQPSSDMADVLLSL 97


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 376 QMMLSLAITE*INWYFSLCYVFW 444
           Q ++ L   E + W + L + FW
Sbjct: 118 QFIVKLPSAERVAWMWCLIFAFW 140


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 376 QMMLSLAITE*INWYFSLCYVFW 444
           Q ++ L   E + W + L + FW
Sbjct: 118 QFIVKLPSAERVAWMWCLIFAFW 140


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 376 QMMLSLAITE*INWYFSLCYVFW 444
           Q ++ L   E + W + L + FW
Sbjct: 118 QFIVKLPSAERVAWMWCLIFAFW 140


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +1

Query: 376 QMMLSLAITE*INWYFSLCYVFW 444
           Q ++ L   E + W + L + FW
Sbjct: 118 QFIVKLPSAERVAWMWCLIFAFW 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,999
Number of Sequences: 336
Number of extensions: 4246
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)