Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0580
         (772 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0212 + 1412202-1412418,1412789-1412853,1413015-1413063,141...    61   1e-09
03_05_1160 + 30826972-30828375,30828641-30828754,30828901-308290...    35   0.083
12_01_0819 + 7545656-7546006,7546087-7546162,7547196-7547401,754...    31   1.3  
05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889           29   3.1  
03_05_0833 - 28045442-28045881,28045961-28046063,28046172-280462...    29   3.1  
01_02_0098 - 11087875-11089110,11091744-11092022                       29   4.1  
10_06_0126 - 11024495-11024905                                         29   5.4  
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202     29   5.4  
03_06_0386 + 33555682-33556344,33557138-33557299                       29   5.4  

>02_01_0212 +
           1412202-1412418,1412789-1412853,1413015-1413063,
           1413775-1413869,1414024-1414109,1414185-1414244,
           1414322-1414403,1415228-1415341,1415444-1415608
          Length = 310

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 26/69 (37%), Positives = 40/69 (57%)
 Frame = +2

Query: 2   SDVEAWQELCNLYLQVQDYSRAVFCAEEXXXXXXXXXXXXXXXADIRYTMGGIENLELAK 181
           +D +AW+EL   Y+ +Q Y +A FC EE               A++ YTMGG+ENL+ A+
Sbjct: 174 ADHDAWRELAETYVALQMYKQAAFCYEELILAQPTVPLYHLAYAEVLYTMGGLENLQTAR 233

Query: 182 LYYCQSVKL 208
            YY  +++L
Sbjct: 234 KYYASTIQL 242


>03_05_1160 +
           30826972-30828375,30828641-30828754,30828901-30829032,
           30830087-30830224
          Length = 595

 Score = 34.7 bits (76), Expect = 0.083
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +3

Query: 282 REQWQAQGSVETVPLGSVQSNQTNSADKSTVPDDA 386
           R+QW+   S +++P G  +S  T+SA+ ST PD++
Sbjct: 144 RKQWEKAASRKSMPQGFRKSTSTSSAESSTQPDES 178


>12_01_0819 +
           7545656-7546006,7546087-7546162,7547196-7547401,
           7547498-7547584,7547673-7547765,7548172-7548326,
           7548470-7548554,7548632-7548718,7548801-7548920,
           7549707-7549808,7549903-7550070
          Length = 509

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -2

Query: 726 EEMRSVLSSYKTCCPVSPC 670
           +EM+S+LSS    CPVSPC
Sbjct: 406 DEMQSILSSEGDTCPVSPC 424


>05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889
          Length = 493

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 558 GIRNSSKQCYYK*ISNCINPKYTYQH 481
           G R + + C+Y    NC+NP  T++H
Sbjct: 43  GARFNRRNCWYWFKGNCVNPSCTFRH 68


>03_05_0833 -
           28045442-28045881,28045961-28046063,28046172-28046203,
           28046299-28046516,28046606-28046721,28047757-28048000,
           28048423-28048510,28048596-28048667,28048758-28048869,
           28049047-28049115,28049627-28049685,28050067-28050325
          Length = 603

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 648 HQDNVLRYMEKQGNMFYMNLTHSAFPLELISRKY 749
           + +N++ Y+ KQG + Y+NL H   PL L  +KY
Sbjct: 179 YYNNLIDYVIKQGLIPYVNLNHYDLPLAL-QKKY 211


>01_02_0098 - 11087875-11089110,11091744-11092022
          Length = 504

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 259 LLNHYKSSGNSGKRKEVWKLCHWAQSKATKQT 354
           LL+HY +SGN  + K +W+    A  K T ++
Sbjct: 285 LLSHYANSGNLSEVKRIWESLKSAFKKCTNRS 316


>10_06_0126 - 11024495-11024905
          Length = 136

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 17/51 (33%), Positives = 21/51 (41%)
 Frame = -3

Query: 191 SNTVLPTPDFRCRPLCTEYQLASDDASGCEADGGVVLRRRTRHESSPEPEG 39
           SNT     +   R   T+   ++    G    GG VLRRR RH     P G
Sbjct: 35  SNTHSTAVEDDSRKRATKSSSSTYGGGGGGGSGGGVLRRRQRHRDEATPSG 85


>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
          Length = 711

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 552 RNSSKQCYYK*ISNCINPKYTYQH 481
           R + + C+Y   SNC+NPK  ++H
Sbjct: 62  RMNPRDCWYWLNSNCLNPKCPFRH 85


>03_06_0386 + 33555682-33556344,33557138-33557299
          Length = 274

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 4   RCGSLARALQPVPSGSGLLSCRVLRR 81
           +CGS+   + P P GSG+++ RV ++
Sbjct: 170 KCGSVTVRMVPAPRGSGIVAARVPKK 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,212,714
Number of Sequences: 37544
Number of extensions: 439298
Number of successful extensions: 1145
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)