Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0580
         (772 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      24   6.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.9  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.9  

>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 33  TCTFRFRTTLVPCSAPKNYSSISL 104
           T   +  T+ +PC +PK  +SI L
Sbjct: 62  THVMQLSTSAIPCCSPKKMNSIRL 85


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 558  GIRNSSKQCYYK*ISNCINPKYTYQH 481
            G  + S Q   K   NC+N   TY H
Sbjct: 1687 GPNDGSSQTEMKPKQNCVNSSNTYNH 1712


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 229 AAGSVLDNKNL-LNHYKSSGNSGKRKEVWKLCH 324
           AAG+     N+ L  ++S  N GK K  W +CH
Sbjct: 235 AAGTQWARINVSLPDFQSFLNLGKLKVGWSICH 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,905
Number of Sequences: 2352
Number of extensions: 16499
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)