Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0579
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   5.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   5.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 3   REKQRRKRGIIAPHP 47
           ++K+R K G+I P P
Sbjct: 307 KQKKRMKEGLIPPEP 321


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 217 SKLEVSSFVKERVKSSVCFGFRT 285
           SKL+    V+  +  + CFGF T
Sbjct: 513 SKLQTGGKVETSICKNFCFGFIT 535


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 3   REKQRRKRGIIAPHP 47
           ++K+R K G+I P P
Sbjct: 96  KQKKRMKEGLIPPEP 110


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 3   REKQRRKRGIIAPHP 47
           ++K+R K G+I P P
Sbjct: 96  KQKKRMKEGLIPPEP 110


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 320 NFGPGEVFGELAI 358
           N+GP E  GELA+
Sbjct: 338 NWGPQEGLGELAV 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,581
Number of Sequences: 336
Number of extensions: 3263
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)