Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0579
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0453 + 10420585-10421661,10422015-10422146,10422232-104224... 40 0.002
12_01_0010 + 74517-74529,76294-76394,76495-76526,76652-76662,804... 29 3.2
11_01_0010 + 78629-78641,80422-80522,80633-80664,80790-80800,845... 29 3.2
02_02_0300 - 8746526-8747224,8749033-8749089,8749414-8749650,875... 29 4.3
09_06_0270 + 21954652-21955245,21955827-21955964,21956050-219562... 28 5.6
08_02_0934 + 22747742-22748644 28 5.6
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 28 5.6
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028... 28 5.6
02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328... 28 5.6
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 28 5.6
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 28 5.6
04_04_0016 - 22167780-22167873,22167978-22168272,22168380-221684... 28 7.5
02_01_0668 - 4969141-4970520,4970597-4971463 28 7.5
08_02_0270 + 15108178-15108587,15108678-15108774,15109445-151094... 27 9.9
06_01_0614 + 4448129-4448157,4448733-4449231,4449512-4449550,444... 27 9.9
>02_02_0453 +
10420585-10421661,10422015-10422146,10422232-10422456,
10422555-10422680,10422777-10422839,10423214-10423296,
10424078-10424309,10424421-10424489,10424532-10424731,
10424819-10424894,10425015-10425081,10425194-10425471,
10425600-10425787,10426235-10426391,10426496-10426741
Length = 1072
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +2
Query: 341 FGELAILYKAKRFASIRCITEARVWTLERRVFQKIMVRSERQEQEDNIRFLSSVPLCKKY 520
FGELA++Y AS+R +T +W L+R F+ I++ +++ L SV L +
Sbjct: 563 FGELALMYNKPLQASVRAVTTGTLWALKREDFRGILM--SEFSNIPSLKLLRSVELFTRL 620
Query: 521 TIL 529
T+L
Sbjct: 621 TML 623
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 547 DFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
D ++R G VV+QG G+ FY++ GE V
Sbjct: 504 DCMQRVEVKAGDIVVQQGGEGECFYVVGSGEFEV 537
>12_01_0010 + 74517-74529,76294-76394,76495-76526,76652-76662,
80420-80924,80999-81181,81282-81373,81491-81764,
81840-82053,82158-82228,82403-82509,82967-83016,
83125-83208,84060-84119,84196-84285,84824-84900,
85022-85106,85224-85304,85492-85595,85793-85842,
86625-86731,87603-87725,87838-87889,88090-88202,
88265-88405,88513-88602
Length = 969
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = -3
Query: 492 RKRILSSCSWRSLRTMIF*KTLLSNVHTLASVIHRIEANRLALYKIASSPKTSPGPKFLT 313
R+R ++ + +R L+ + ++HR ANRL Y+ A+ K P + +
Sbjct: 874 RQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGI- 932
Query: 312 TWPLFNASNCPEAE 271
WPL A+ P+ E
Sbjct: 933 NWPLIRATAPPKLE 946
>11_01_0010 + 78629-78641,80422-80522,80633-80664,80790-80800,
84559-85063,85136-85318,85419-85510,85628-85901,
85977-86190,86295-86365,86540-86646,87104-87153,
87262-87345,88197-88256,88333-88422,88961-89037,
89160-89244,89362-89442,89630-89733,89931-89980,
90764-90870,91743-91865,91978-92029,92230-92342,
92404-92544,92656-92745
Length = 969
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = -3
Query: 492 RKRILSSCSWRSLRTMIF*KTLLSNVHTLASVIHRIEANRLALYKIASSPKTSPGPKFLT 313
R+R ++ + +R L+ + ++HR ANRL Y+ A+ K P + +
Sbjct: 874 RQRTFANILHKDIRFPASISVSLAARQLMYRLLHRDPANRLGSYEGANEIKGHPFFRGI- 932
Query: 312 TWPLFNASNCPEAE 271
WPL A+ P+ E
Sbjct: 933 NWPLIRATAPPKLE 946
>02_02_0300 -
8746526-8747224,8749033-8749089,8749414-8749650,
8750061-8750172,8750258-8750538,8752032-8752244,
8753105-8753636,8753871-8753899
Length = 719
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 165 MDDERLNAVVGAMMTQDFEAGSLIIREGESEVICLFRLQDNLK 293
MD++ L+A+ + + GS IIREG+ LF ++ NL+
Sbjct: 494 MDEKLLDAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLE 536
>09_06_0270 +
21954652-21955245,21955827-21955964,21956050-21956295,
21956407-21956520,21956633-21956815,21956926-21957143,
21957210-21957246,21957865-21958219,21958284-21958337,
21958513-21958529
Length = 651
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 15 RRKRGIIAPHPTFDAARSLTDLQYDVFEKDERSAEQIRK 131
RR+ + A PT DA + T YD E + AE +R+
Sbjct: 55 RRRDPVAACAPTADAETASTSRSYDALEAERAVAELLRE 93
>08_02_0934 + 22747742-22748644
Length = 300
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 253 LSPSRMMRLPASKSCVIIAPTT 188
++P+ M RLPA+ SCV +A TT
Sbjct: 208 VAPAGMWRLPAAASCVGLATTT 229
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 165 MDDERLNAVVGAMMTQDFEAGSLIIREGESEVICLFRLQDNL 290
MDD+ LNA+ + + GS IIRE + LF ++ NL
Sbjct: 513 MDDQLLNALCDRLKPVLYTEGSCIIREEDPVNEMLFIMRGNL 554
>05_03_0408 +
13601576-13601748,13601795-13602104,13602597-13602834,
13603014-13603364,13603457-13603542,13603685-13603759,
13604241-13604542,13605359-13605622,13606032-13606806
Length = 857
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +1
Query: 538 QISDFLKREFFSTGTAVVRQGDRGDKFYI 624
Q++ F+ EF + G V+ G+R D+F++
Sbjct: 96 QVTFFVDGEFGTPGAVAVKNGNRNDQFFL 124
>02_05_0785 -
31730300-31730701,31730785-31730856,31730940-31732864,
31733000-31733150,31733944-31734009,31734247-31734645
Length = 1004
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 264 CLFRLQDNLKR*KVAKSLRTLDQAKFLVNWQSYIKPNDSLQYD 392
CL+ + NLK + +L+ AK ++ + P DS +Y+
Sbjct: 560 CLYEISKNLKEIRFKGGALSLETAKLMIQFDEGGAPCDSFRYE 602
>02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 15 RRKRGIIAPHPTFDAARSLTDLQYDVFEKDERSAEQIRKAIMMNDFLRNLMD 170
RR G+++ PT A ++ Y E E ++ +DF+ NL D
Sbjct: 1072 RRHIGLVSQEPTLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKD 1123
>02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +3
Query: 15 RRKRGIIAPHPTFDAARSLTDLQYDVFEKDERSAEQIRKAIMMNDFLRNLMD 170
RR G+++ PT A ++ Y E E ++ +DF+ NL D
Sbjct: 1062 RRHIGLVSQEPTLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKD 1113
>04_04_0016 -
22167780-22167873,22167978-22168272,22168380-22168455,
22168665-22168853,22168955-22169176,22169315-22169413,
22169502-22169582,22169753-22170060,22171611-22171950,
22172047-22172110,22172191-22172412,22172865-22173043
Length = 722
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 532 LAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGG 636
L+QI L EFF G ++ QG D+ YI+ G
Sbjct: 395 LSQIVLKLHEEFFLPGEVILEQGTVVDQIYIVAHG 429
>02_01_0668 - 4969141-4970520,4970597-4971463
Length = 748
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 15 RRKRGIIAPHPTFDAARSLTDLQYDVFEKDERSAEQIRKAIMMNDFLRNLMD 170
RR G+++ PT A ++ Y + E E ++ +DF+ NL D
Sbjct: 575 RRHIGLVSQEPTLFAGTIRENIVYGIDIASEVEIEDAARSANAHDFISNLKD 626
>08_02_0270 + 15108178-15108587,15108678-15108774,15109445-15109492,
15109583-15109806,15111367-15111463,15111556-15111651,
15112297-15112544,15112632-15112715,15112787-15113236,
15114880-15115024,15115116-15115217,15115677-15115769,
15117308-15117349,15119085-15119113,15119210-15119251,
15119922-15119997,15120764-15120835,15121208-15121326,
15121428-15121491,15121576-15123009
Length = 1323
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -2
Query: 589 PPLYRWRRILFLRNRIFVLIQYGVFLAKRHRRKKTNIVFLFL-AFTSNHD 443
PPLY W R + + + Q+G A + ++V+LF T NHD
Sbjct: 869 PPLYLWSRPDWTQKHKRIAEQHGHTKANVFSHNEEDLVYLFEDRATQNHD 918
>06_01_0614 +
4448129-4448157,4448733-4449231,4449512-4449550,
4449590-4449802,4449941-4450227,4450456-4450567,
4451515-4451751,4451857-4451957,4452285-4452384,
4452509-4453141
Length = 749
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 159 NLMDDERLNAVVGAMMTQDFEAGSLIIREGESEVICLFRLQDNLK 293
+LMD + L+A+ +++ G+ I+REG+ LF ++ L+
Sbjct: 538 SLMDGQLLDAICERLVSSLSTVGTYIVREGDPVTEMLFIIRGKLE 582
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,825,436
Number of Sequences: 37544
Number of extensions: 351495
Number of successful extensions: 853
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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