Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0579
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 64 1e-10
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 64 1e-10
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 64 1e-10
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 64 1e-10
U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 45 4e-05
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 45 4e-05
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 45 4e-05
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 43 2e-04
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 43 2e-04
AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying de... 36 0.019
M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical pr... 34 0.10
M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical pr... 34 0.10
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical p... 30 1.2
Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical pr... 30 1.2
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 30 1.2
U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegr... 29 2.2
M77697-9|AAA27904.1| 407|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 29 3.8
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 29 3.8
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 27 8.8
U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical pr... 27 8.8
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
LFV A G+ + + G ++ G V GELAILY R AS++ +T+ ++W L+R VFQ
Sbjct: 207 LFVVAEGELQVSREGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQM 266
Query: 443 IMVRSERQEQEDNIRFLSSVPL 508
I R + + FL+ V +
Sbjct: 267 ITQRLGMERHSQLMNFLTKVSI 288
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/47 (29%), Positives = 32/47 (68%)
Frame = +1
Query: 511 QEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVVT 651
Q + +++++D + ++++ G ++RQG++GD F++I G+V VT
Sbjct: 290 QNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVT 336
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
LFV A G+ + + G ++ G V GELAILY R AS++ +T+ ++W L+R VFQ
Sbjct: 201 LFVVAEGELQVSREGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQM 260
Query: 443 IMVRSERQEQEDNIRFLSSVPL 508
I R + + FL+ V +
Sbjct: 261 ITQRLGMERHSQLMNFLTKVSI 282
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/47 (29%), Positives = 32/47 (68%)
Frame = +1
Query: 511 QEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVVT 651
Q + +++++D + ++++ G ++RQG++GD F++I G+V VT
Sbjct: 284 QNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVT 330
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
LFV A G+ + + G ++ G V GELAILY R AS++ +T+ ++W L+R VFQ
Sbjct: 195 LFVVAEGELQVSREGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQM 254
Query: 443 IMVRSERQEQEDNIRFLSSVPL 508
I R + + FL+ V +
Sbjct: 255 ITQRLGMERHSQLMNFLTKVSI 276
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/47 (29%), Positives = 32/47 (68%)
Frame = +1
Query: 511 QEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVVT 651
Q + +++++D + ++++ G ++RQG++GD F++I G+V VT
Sbjct: 278 QNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVT 324
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
LFV A G+ + + G ++ G V GELAILY R AS++ +T+ ++W L+R VFQ
Sbjct: 238 LFVVAEGELQVSREGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQM 297
Query: 443 IMVRSERQEQEDNIRFLSSVPL 508
I R + + FL+ V +
Sbjct: 298 ITQRLGMERHSQLMNFLTKVSI 319
Score = 42.7 bits (96), Expect = 2e-04
Identities = 14/47 (29%), Positives = 32/47 (68%)
Frame = +1
Query: 511 QEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVVT 651
Q + +++++D + ++++ G ++RQG++GD F++I G+V VT
Sbjct: 321 QNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVT 367
>U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical
protein C09G4.2a protein.
Length = 581
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
++V G+ + +K + V+ G +FGELAIL+ +R A++R I +W +ER VF
Sbjct: 73 MYVIQEGKVQVVKDNRFVRTMEDGALFGELAILHHCERTATVRAIESCHLWAIERNVFHA 132
Query: 443 IMVRSERQE 469
IM+ S R++
Sbjct: 133 IMMESAREK 141
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/75 (30%), Positives = 42/75 (56%)
Frame = +3
Query: 105 ERSAEQIRKAIMMNDFLRNLMDDERLNAVVGAMMTQDFEAGSLIIREGESEVICLFRLQD 284
+R+ E I A+ +N FLRNL D ++ + AM + AG++IIR+G+ I +
Sbjct: 21 KRAFETIGNALRLNSFLRNL-DATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEG 79
Query: 285 NLKR*KVAKSLRTLD 329
++ K + +RT++
Sbjct: 80 KVQVVKDNRFVRTME 94
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L+ + ++ +IS + G ++RQGD G Y+I+ G+V V
Sbjct: 37 LRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEGKVQV 83
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/69 (36%), Positives = 42/69 (60%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQK 442
++V G+ + +K + V+ G +FGELAIL+ +R A++R I +W +ER VF
Sbjct: 109 MYVIQEGKVQVVKDNRFVRTMEDGALFGELAILHHCERTATVRAIESCHLWAIERNVFHA 168
Query: 443 IMVRSERQE 469
IM+ S R++
Sbjct: 169 IMMESAREK 177
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/80 (28%), Positives = 43/80 (53%)
Frame = +3
Query: 90 VFEKDERSAEQIRKAIMMNDFLRNLMDDERLNAVVGAMMTQDFEAGSLIIREGESEVICL 269
+ K + + E I A+ +N FLRNL D ++ + AM + AG++IIR+G+ I
Sbjct: 52 IIGKSDAAFETIGNALRLNSFLRNL-DATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMY 110
Query: 270 FRLQDNLKR*KVAKSLRTLD 329
+ ++ K + +RT++
Sbjct: 111 VIQEGKVQVVKDNRFVRTME 130
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L+ + ++ +IS + G ++RQGD G Y+I+ G+V V
Sbjct: 73 LRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEGKVQV 119
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/81 (25%), Positives = 44/81 (54%)
Frame = +2
Query: 266 FVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQKI 445
+V G + + + V G FGELA++Y R A++ T+ ++W ++R +++I
Sbjct: 128 YVIDKGTVDVYVNHEYVLTINEGGSFGELALIYGTPRAATVIAKTDVKLWAIDRLTYRRI 187
Query: 446 MVRSERQEQEDNIRFLSSVPL 508
++ S ++++ FLS V +
Sbjct: 188 LMGSVTKKRKMYDEFLSKVQI 208
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L ++ E A ++D L+R F GT VV QG GD+F+II GE V
Sbjct: 209 LADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANV 255
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 571 STGTAVVRQGDRGDKFYIIRGGEVVV 648
S G ++ QG+ GD FY+I G V V
Sbjct: 112 SAGETIIEQGEEGDNFYVIDKGTVDV 137
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/81 (25%), Positives = 44/81 (54%)
Frame = +2
Query: 266 FVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQKI 445
+V G + + + V G FGELA++Y R A++ T+ ++W ++R +++I
Sbjct: 160 YVIDKGTVDVYVNHEYVLTINEGGSFGELALIYGTPRAATVIAKTDVKLWAIDRLTYRRI 219
Query: 446 MVRSERQEQEDNIRFLSSVPL 508
++ S ++++ FLS V +
Sbjct: 220 LMGSVTKKRKMYDEFLSKVQI 240
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L ++ E A ++D L+R F GT VV QG GD+F+II GE V
Sbjct: 241 LADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANV 287
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 571 STGTAVVRQGDRGDKFYIIRGGEVVV 648
S G ++ QG+ GD FY+I G V V
Sbjct: 144 SAGETIIEQGEEGDNFYVIDKGTVDV 169
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/81 (25%), Positives = 44/81 (54%)
Frame = +2
Query: 266 FVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQKI 445
+V G + + + V G FGELA++Y R A++ T+ ++W ++R +++I
Sbjct: 170 YVIDKGTVDVYVNHEYVLTINEGGSFGELALIYGTPRAATVIAKTDVKLWAIDRLTYRRI 229
Query: 446 MVRSERQEQEDNIRFLSSVPL 508
++ S ++++ FLS V +
Sbjct: 230 LMGSVTKKRKMYDEFLSKVQI 250
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L ++ E A ++D L+R F GT VV QG GD+F+II GE V
Sbjct: 251 LADLDQWERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANV 297
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 571 STGTAVVRQGDRGDKFYIIRGGEVVV 648
S G ++ QG+ GD FY+I G V V
Sbjct: 154 SAGETIIEQGEEGDNFYVIDKGTVDV 179
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 43.2 bits (97), Expect = 2e-04
Identities = 14/53 (26%), Positives = 34/53 (64%)
Frame = +1
Query: 493 FFCAALQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVVT 651
+ + Q + +++++D + ++++ G ++RQG++GD F++I G+V VT
Sbjct: 5 YVVSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVT 57
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/81 (24%), Positives = 43/81 (53%)
Frame = +2
Query: 266 FVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCITEARVWTLERRVFQKI 445
+V G + + + V G FGELA++Y R A++ + ++W ++R +++I
Sbjct: 170 YVIDKGTVDVYVNHEYVLTINEGGSFGELALIYGTPRAATVIAKIDVKLWAIDRLTYRRI 229
Query: 446 MVRSERQEQEDNIRFLSSVPL 508
++ S ++++ FLS V +
Sbjct: 230 LMGSVTKKRKMYDEFLSKVQI 250
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +1
Query: 508 LQEIHHIELAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
L ++ E ++D L+R F GT VV QG GD+F+II GE V
Sbjct: 251 LADLDQWERVNVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANV 297
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 571 STGTAVVRQGDRGDKFYIIRGGEVVV 648
S G ++ QG+ GD FY+I G V V
Sbjct: 154 SAGETIIEQGEEGDNFYVIDKGTVDV 179
>AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying
defective protein 4,isoform d protein.
Length = 195
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 371 KRFASIRCITEARVWTLERRVFQKIMVRSERQEQEDNIRFLSSVPL 508
K+ AS++ +T+ ++W L+R VFQ I R + + FL+ V +
Sbjct: 86 KKTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSI 131
>M98552-4|AAP68923.1| 1353|Caenorhabditis elegans Hypothetical
protein ZK370.4b protein.
Length = 1353
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCI 397
LFV SG+ +++ VV+ FG G+V G + +L K R ++ +
Sbjct: 614 LFVVLSGRLRSVEKKTVVEEFGRGDVLGMMEVLTKKPRATTVLAV 658
>M98552-3|AAP68922.1| 1342|Caenorhabditis elegans Hypothetical
protein ZK370.4a protein.
Length = 1342
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 263 LFVSASGQFEALKSGQVVKNFGPGEVFGELAILYKAKRFASIRCI 397
LFV SG+ +++ VV+ FG G+V G + +L K R ++ +
Sbjct: 603 LFVVLSGRLRSVEKKTVVEEFGRGDVLGMMEVLTKKPRATTVLAV 647
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 496 FCAALQEIHHIELAQISDFLKRE-FFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
F AL + + Q+S+F+K E + G+ V RQG+ G +YI+ G V V
Sbjct: 568 FIKALSHLSTMVKRQLSNFVKVEQYVHAGSVVFRQGEIGVYWYIVLKGAVEV 619
>Z49968-12|CAA90264.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 574 TGTAVVRQGDRGDKFYIIRGGEV 642
TG A+ RQGD+ D +I+ GG +
Sbjct: 261 TGQALFRQGDKSDSMHIVMGGRL 283
>Z49966-8|CAA90246.1| 880|Caenorhabditis elegans Hypothetical
protein M110.7 protein.
Length = 880
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 574 TGTAVVRQGDRGDKFYIIRGGEV 642
TG A+ RQGD+ D +I+ GG +
Sbjct: 261 TGQALFRQGDKSDSMHIVMGGRL 283
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 463 PGTGRQYSFSFFCAALQEIHHIELAQ 540
P T +Y SFFCA+++ H ELA+
Sbjct: 140 PNTAEKYGQSFFCASMEVQHLTELAE 165
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 463 PGTGRQYSFSFFCAALQEIHHIELAQ 540
P T +Y SFFCA+++ H ELA+
Sbjct: 115 PNTAEKYGQSFFCASMEVQHLTELAE 140
>U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegrin
plus metalloprotease)family protein 4 protein.
Length = 686
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 572 EKNSLFKKSDICANSIWCISCKAAQKKENEYCLPVPG 462
EK S+ KKS IC + +SC+ + N C PVPG
Sbjct: 555 EKMSIGKKSCICEDLE--LSCRLCCRDYNGTCAPVPG 589
>M77697-9|AAA27904.1| 407|Caenorhabditis elegans Hypothetical
protein B0303.14 protein.
Length = 407
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = +3
Query: 3 REKQRRKRGIIAPHPTFDAARSLTDLQYDVFEKDERSAEQIRKAIMMNDFLRNLMDDERL 182
R++ +R ++A + + D D+ +++RSA QI++ I+ + L + MD++
Sbjct: 124 RKQTKRVENVVASEELLEL-EDIIDQISDLNVRNDRSAAQIKRNILGSHDLIDTMDEDDW 182
Query: 183 NAVVGAMMTQDFEAG 227
V +M+ E G
Sbjct: 183 QKVCESMIKTALEQG 197
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 532 LAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
LA++ L+ + FS G + ++GD G + YI++ G + V
Sbjct: 502 LAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQV 540
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 532 LAQISDFLKREFFSTGTAVVRQGDRGDKFYIIRGGEVVV 648
LA++ L+ + FS G + ++GD G + YI++ G + V
Sbjct: 502 LAELVLKLQLQVFSPGDFICKKGDIGREMYIVKRGRLQV 540
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 528 NMVYFLQSGTEERKRILSSCSWRSLRTMIF 439
N+V FLQ + K I SCS+ L +IF
Sbjct: 220 NLVEFLQLFEDAEKCISKSCSYNDLERLIF 249
>U46753-7|AAA85763.2| 223|Caenorhabditis elegans Hypothetical
protein C34F11.8 protein.
Length = 223
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 75 DLQYDVFEKDERSAEQIRKAIMMNDFLRNLMDDERLNA 188
DL+Y ++ K R + + A M+ + R+ MD+ER ++
Sbjct: 89 DLEYYLWRKRRRQYLRTKAAAMLRERYRDRMDEERADS 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,703
Number of Sequences: 27780
Number of extensions: 318019
Number of successful extensions: 884
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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