Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0578
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.15 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.46 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.46 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   3.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   5.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.6  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
 Frame = -3

Query: 272 LWHIKYAFIIK*IHRLYICVLLL-----FKRFLSVLFKKNVYVCYYVYFF 138
           +++   AFII  IH L+ CVL++     +  +  +LF  ++ +   +Y+F
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF 261



 Score = 26.2 bits (55), Expect = 0.20
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -3

Query: 272 LWHIKYAFIIK*IHRLYICVLLLFKRFLSVLFKKNVYVCYYVYFFP 135
           ++H   AFII  +H L+ C  + F   L  L   + Y   ++ F P
Sbjct: 166 IYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLD-YFTLHLLFLP 210



 Score = 25.8 bits (54), Expect = 0.26
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
 Frame = +1

Query: 220 IYSLCIYLIINAYLICHKE*-----FVFINWQHLSSII---YVV*KLLFTDCIFFFF 366
           ++ LCIY    A++I          F+F N  HL  ++   Y    LLF  CI++F+
Sbjct: 161 LFLLCIYHFFCAFIIFTMHLLFCCAFIFFN-MHLLFLLCLDYFTLHLLFLPCIYYFY 216



 Score = 24.2 bits (50), Expect = 0.80
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 220 IYSLCIYLIINAYLICHKE*FVFINWQHLSSIIYVV*KLLFTDCIFFFF 366
           I  LC+Y    A++I        ++   L  I Y V  L F  CI++F+
Sbjct: 108 IILLCVYYFYYAFII------FTVHLLFLLCIYYFVVPLFFLLCIYYFY 150



 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 272 LWHIKYAFIIK*IHRLY-ICVLLLFKRFLSVLFKKNVYVCYYVYF 141
           +++   AFII  +H L+ +C+   F  F+ +     ++ C +++F
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFI-IFTMHLLFCCAFIFF 189



 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +3

Query: 441 CNYFGHSMYLSYILKSHNYCNKIIKCCFVSLHMDLIV 551
           C Y+ +S ++ + +    YC  II  C    +   I+
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFIL 247


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 212 LLLFKRFLSVLFKKNVYVCYYVYFFPSNCDETWHSSLWNSSECVCHSTIN 63
           LLLF   ++VL+   + +CY VY++    ++ WH    +  E  C    N
Sbjct: 102 LLLF--VINVLYV--LTLCYAVYYWRQQYEDFWHRYTLSFIENYCQFLYN 147


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -3

Query: 311 ELKCCQLINTNYSLWHIKYAFIIK*IHRLYICVLLLFKRFLSVLFKKNVYVCYYVYFF 138
           EL  C  I    +L H     + K  + LY   LLL+     +L   + Y+  YV+FF
Sbjct: 223 ELTFCNKIKHLVNL-HKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFF 279


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -3

Query: 260 KYAFIIK*-IHRLYICVLLLFKRFLSVLFKKNVYVCYYVYFFPSNC 126
           K+  I+K  I  +Y+  +L     L V F   +Y   +++FF + C
Sbjct: 36  KFCRILKYFIIAIYVLTILTSSVTLHVCFNSYMYAFTHIFFFFAIC 81


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 436 CIRFFSLSYNCHCHIK 389
           C  FF   ++C+C IK
Sbjct: 415 CSSFFQQFFHCYCPIK 430


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 477 YNLNTYCVQNNCIYVSVFFLSHTIV 403
           Y+L    VQ + I++++ FL H ++
Sbjct: 118 YHLQKINVQQSGIFINLPFLEHNLI 142


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 440 MQLFWTQYVFKL 475
           M+LFW QY  K+
Sbjct: 389 MKLFWAQYTNKM 400


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 492 NYCNKIIKCCFVSLHMDLIV 551
           N+C++ I C    + +DL++
Sbjct: 14  NFCHRYISCLKGKMPIDLVI 33


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 447 YFGHSMYLSYILKSHNYCNKII 512
           YFG +   + +LK++ YCN II
Sbjct: 306 YFGKTGRKT-VLKTNKYCNFII 326


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +3

Query: 492 NYCNKIIKCCFVSLHMDLIV 551
           N+C++ I C    + +DL++
Sbjct: 170 NFCHRYISCLKGKMPIDLVI 189


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 467 IHTVSKIIAYMYPFFFSLIQLSLSY*IMSSDK*TKKKNIQSVNKSF 330
           IHT S    YM   +  LI +S +Y   +  K + K  IQSV+ +F
Sbjct: 123 IHTSS----YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 164


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 467 IHTVSKIIAYMYPFFFSLIQLSLSY*IMSSDK*TKKKNIQSVNKSF 330
           IHT S    YM   +  LI +S +Y   +  K + K  IQSV+ +F
Sbjct: 356 IHTSS----YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 397


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -3

Query: 467 IHTVSKIIAYMYPFFFSLIQLSLSY*IMSSDK*TKKKNIQSVNKSF 330
           IHT S    YM   +  LI +S +Y   +  K + K  IQSV+ +F
Sbjct: 356 IHTSS----YMTGIWVWLINISATYICYAFGKFSCKVMIQSVSFAF 397


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 241  NKYIDYIYVCCFYSRG 194
            +KY+D+I V C+   G
Sbjct: 2004 SKYLDWIAVMCYDYHG 2019


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 289 INWQHLSSIIYVV*KLLFTDCIFFFFVYLSEDII 390
           I W    ++  V   LL T+ IF F +Y +  I+
Sbjct: 60  IYWLQDDALKSVYASLLCTEKIFLFAIYTNLSIL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,786
Number of Sequences: 336
Number of extensions: 3717
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)