Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0578
         (574 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC126440-1|AAI26441.1|  321|Homo sapiens OIT3 protein protein.         32   1.6  
AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.              32   1.6  
AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.                  32   1.6  
AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens ...    32   1.6  

>BC126440-1|AAI26441.1|  321|Homo sapiens OIT3 protein protein.
          Length = 321

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 161 VCYYVY--FFPSNCDETWHSSLWNSSECVC 78
           VC++VY   F   CDE  H S  ++SEC C
Sbjct: 138 VCFHVYCGHFYDICDEDCHGSCSDTSECTC 167


>AY358339-1|AAQ88705.1|  545|Homo sapiens PPFL826 protein.
          Length = 545

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 161 VCYYVY--FFPSNCDETWHSSLWNSSECVC 78
           VC++VY   F   CDE  H S  ++SEC C
Sbjct: 138 VCFHVYCGHFYDICDEDCHGSCSDTSECTC 167


>AY013707-1|AAG40096.2|  545|Homo sapiens LZP protein.
          Length = 545

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 161 VCYYVY--FFPSNCDETWHSSLWNSSECVC 78
           VC++VY   F   CDE  H S  ++SEC C
Sbjct: 138 VCFHVYCGHFYDICDEDCHGSCSDTSECTC 167


>AK096435-1|BAC04788.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39116 fis, clone NTONG2006301, highly similar to
           Mus musculus EF-9 mRNA. ).
          Length = 545

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 161 VCYYVY--FFPSNCDETWHSSLWNSSECVC 78
           VC++VY   F   CDE  H S  ++SEC C
Sbjct: 138 VCFHVYCGHFYDICDEDCHGSCSDTSECTC 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,802,874
Number of Sequences: 237096
Number of extensions: 1605784
Number of successful extensions: 6313
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6313
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)