Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0578
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT004855-1|AAO45211.1|  662|Drosophila melanogaster RE59171p pro...    33   0.27 
AE014134-924|AAF52254.1|  662|Drosophila melanogaster CG7371-PA ...    33   0.27 
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P...    30   1.9  

>BT004855-1|AAO45211.1|  662|Drosophila melanogaster RE59171p
           protein.
          Length = 662

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 157 QT*TFFLNNTERNLLNKSNTHIYSLCIYLIINAYLICHKE*FVFIN--WQHLSSIIYVV* 330
           +T T  + N E ++ +  +T    LCI+LI    L+CHK     ++  W  L ++I+   
Sbjct: 367 KTLTLMIKNLETSIHDCFDTIAMFLCIHLIFRYQLMCHKRCVPALDKYWDSLQAVIWPRF 426

Query: 331 KLLF 342
           +L+F
Sbjct: 427 ELVF 430


>AE014134-924|AAF52254.1|  662|Drosophila melanogaster CG7371-PA
           protein.
          Length = 662

 Score = 33.1 bits (72), Expect = 0.27
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 157 QT*TFFLNNTERNLLNKSNTHIYSLCIYLIINAYLICHKE*FVFIN--WQHLSSIIYVV* 330
           +T T  + N E ++ +  +T    LCI+LI    L+CHK     ++  W  L ++I+   
Sbjct: 367 KTLTLMIKNLETSIHDCFDTIAMFLCIHLIFRYQLMCHKRCVPALDKYWDSLQAVIWPRF 426

Query: 331 KLLF 342
           +L+F
Sbjct: 427 ELVF 430


>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
            isoform A protein.
          Length = 1853

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = -1

Query: 226  YIYVCCFYSRGFFQCYLKKMSMSVIMSIFFHLIAMKLGIVLYGTPAN---VSVIVPSTLI 56
            YIY C ++ RGF +C   KM +  I+ IF  L A+++ I    T        +I PS  +
Sbjct: 1198 YIYSCNYF-RGFSECQKLKMIIRWILVIFM-LTALEISISTTQTTTTELIPCIIFPSLPL 1255

Query: 55   C 53
            C
Sbjct: 1256 C 1256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,881,405
Number of Sequences: 53049
Number of extensions: 474969
Number of successful extensions: 1012
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)