Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0578
(574 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 26 0.23
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 26 0.23
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 26 0.30
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 3.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 3.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 5.0
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 6.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.6
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 6.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 8.7
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.23
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 537 YVKKQNNIL*SYCNSYDFLIYNLN 466
Y NN YCN+Y L YN+N
Sbjct: 89 YNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 26.2 bits (55), Expect = 0.23
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 537 YVKKQNNIL*SYCNSYDFLIYNLN 466
Y NN YCN+Y L YN+N
Sbjct: 89 YNYNNNNYKKLYCNNYKKLYYNIN 112
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 25.8 bits (54), Expect = 0.30
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 537 YVKKQNNIL*SYCNSYDFLIYNLN 466
Y NN YCN+Y L YN+N
Sbjct: 89 YNYNNNNYKKLYCNNYRKLYYNIN 112
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 3.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 528 KQNNIL*SYCNSYDFLIYNLNTY 460
K+ I+ S N+Y++ YN N Y
Sbjct: 77 KEPKIISSLSNNYNYSNYNNNNY 99
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/46 (21%), Positives = 24/46 (52%)
Frame = -1
Query: 193 FFQCYLKKMSMSVIMSIFFHLIAMKLGIVLYGTPANVSVIVPSTLI 56
F + ++++ + ++ H++A I++ G + IV +TLI
Sbjct: 2 FTENVVEELLSPLTLNRITHILANSPAIIILGQDSKAKAIVVNTLI 47
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 136 HLIAMKLGIVLYGTPANVSVIVPSTLI 56
H++A I++ G + IV +TLI
Sbjct: 59 HILANSPAIIILGQDSKAKAIVVNTLI 85
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 6.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 178 NNTERNLLNKSNTHIYSLCIYLIIN 252
NN N N NT+ L Y IIN
Sbjct: 95 NNNYNNYNNNYNTNYKKLQYYNIIN 119
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 522 NNIL*SYCNSYDFLIYNLN 466
NN +Y N+Y L YN+N
Sbjct: 338 NNYNNNYNNNYKKLYYNIN 356
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.4 bits (43), Expect = 6.6
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = -2
Query: 477 YNLNTYCVQNNCIYVSVFFLSHTIVT--VILNNVFRQINKKEKYTI--CEQKFLH 325
Y L Y + NC YV+++ S ++ V ++N E TI C++ H
Sbjct: 206 YTLRNYGRRINCTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTIRKCDESSPH 260
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 142 FFHLIAMKLGIVLYGTPA 89
F +I+M G+VLY TP+
Sbjct: 164 FCAVISMHDGLVLYTTPS 181
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 142 FFHLIAMKLGIVLYGTPA 89
F +I+M G+VLY TP+
Sbjct: 159 FCAVISMHDGLVLYTTPS 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,756
Number of Sequences: 438
Number of extensions: 3914
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -