Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0576
         (570 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   5.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   7.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   7.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.8  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 132 VHNNNVAVGDGQQGG 88
           V+NN +  GDG  GG
Sbjct: 505 VYNNKIPTGDGALGG 519


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 509 VSTCSHSRAYELYASTVRHN 568
           V +CS+ +  E +A  +RHN
Sbjct: 381 VDSCSNIQTGEQFARLLRHN 400


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 509 VSTCSHSRAYELYASTVRHN 568
           V +CS+ +  E +A  +RHN
Sbjct: 388 VDSCSNIQTGEQFARLLRHN 407


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 51  QQRKLRCEHHDPPRLAGRLRLQRYCCGL 134
           Q R+++ +  D P  AG+      CC L
Sbjct: 166 QNRRVKYKKEDLPAAAGKASNGNKCCCL 193


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 34  IVHGWNSNGNSAVNTMIRPALLAVSD 111
           IV   NS G  A+N +   ALLA+ D
Sbjct: 316 IVSFTNSEGLYAINEIYDNALLALLD 341


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 34  IVHGWNSNGNSAVNTMIRPALLAVSD 111
           IV   NS G  A+N +   ALLA+ D
Sbjct: 316 IVSFTNSEGLYAINEIYDNALLALLD 341


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 246 PIAASVVDEPDQKVAKELSDTGNSIDGSVV 157
           P+ ++    PD++     SD     DG VV
Sbjct: 836 PLNSTPRSTPDKREKSPTSDKAQEADGEVV 865


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = -2

Query: 404 ISSCVTVQGLVVTTPPGPSWIQTGNPVGSATSLSSSVTDNVRAQAEANQVTRPQLPPP 231
           ISS   + GL   T PG   + + +   ++ S+S +    +++    ++    +LPPP
Sbjct: 681 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 738


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = -2

Query: 404 ISSCVTVQGLVVTTPPGPSWIQTGNPVGSATSLSSSVTDNVRAQAEANQVTRPQLPPP 231
           ISS   + GL   T PG   + + +   ++ S+S +    +++    ++    +LPPP
Sbjct: 573 ISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVASPYMLQSPLTPHEAFDVKLPPP 630


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 503 LQVSTCSHSRAYELYASTVRH 565
           LQV   SH+  YEL   T R+
Sbjct: 274 LQVLDLSHNSLYELDFDTFRN 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,476
Number of Sequences: 336
Number of extensions: 4067
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)