Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0576
(570 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 74 7e-14
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 7e-14
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 67 8e-12
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 48 7e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 43 2e-04
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_16790| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_40390| Best HMM Match : BON (HMM E-Value=0.68) 29 2.7
SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05) 29 2.7
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 3.5
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5) 29 3.5
SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036) 28 4.7
SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26) 28 4.7
SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65) 28 4.7
SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 28 6.2
SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
SB_28381| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 74.1 bits (174), Expect = 7e-14
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 5/106 (4%)
Frame = +3
Query: 204 QLFGLAHQQRRRQLGSSHLIGFSLGAHVVGNAGR---QAGGRPNRVTGLDPAGPRWGGNN 374
+L + ++ R+L H+IGFS GAHV G GR + G +R+T LDPA + ++
Sbjct: 175 RLLQILEERSGRKLAYVHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAMWFHKHH 234
Query: 375 Q--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGC 506
+ L+ + +V+ IHT GI I H DFYPNGG+ QPGC
Sbjct: 235 EDVRLDTSDALFVDVIHTSAD-YGITSTIGHADFYPNGGKK-QPGC 278
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 74.1 bits (174), Expect = 7e-14
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Frame = +3
Query: 204 QLFGLAHQQRRRQLGSSHLIGFSLGAHVVGNAGRQ---AGGRPNRVTGLDPAGPRWGGNN 374
+L + Q S +L+GFSLGAH+ G GR+ G + NR+TGLDPA + +
Sbjct: 673 ELIKFLNNQTGNTPASFYLVGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAH 732
Query: 375 Q--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCR 509
L+ + +V+ +HTD L G H DFYPNGG+ QPGCR
Sbjct: 733 VDVRLDPSDADFVDVMHTDMDLAGTPTVSGHIDFYPNGGKK-QPGCR 778
Score = 31.1 bits (67), Expect = 0.66
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +1
Query: 82 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGN 243
IR AL+ D NVI DW A Y A VG + L+ +NN GN
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITE-LIKFLNNQTGN 684
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 67.3 bits (157), Expect = 8e-12
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Frame = +3
Query: 237 RQLGSSHLIGFSLGAHVVGNAG---RQAGGRPNRVTGLDPAGPRWGGN--NQALNRNAGA 401
R+ G+ H IGFSLGAH+ G G ++ G +R+TGLDPA + G + L+R
Sbjct: 168 REGGAFHSIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQ 227
Query: 402 YVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCRL 512
+V+ IHT + GI H DFYPNGG + Q GC L
Sbjct: 228 FVDVIHT-SYVFGITAPHGHMDFYPNGGTS-QRGCSL 262
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +1
Query: 82 IRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWG 249
++ LL SD NVI+VDW A Y AV VG + F+ +++ G G
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREG 170
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 1 SNYNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGV 180
S Y+G FVI HG+ +G+++ +R ALL D NV++ DW A+G+Y A
Sbjct: 96 STYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDWGPGADGMYWQATANT 155
Query: 181 PSVG 192
VG
Sbjct: 156 RLVG 159
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 339 LDPAGPRWGGNNQ--ALNRNAGAYVEAIHTDGGLLGIFDRIAHGDFYPNGGRNPQPGCR 509
LDPAG + + L+ + +V+ +HTD G + H DFYPNGG+N QPGCR
Sbjct: 2 LDPAGLYFVNEHVDVRLDPSDAEFVDVMHTDMDFAGTSTQSGHIDFYPNGGKN-QPGCR 59
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 7 YNGNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANG--LYNTAVNGV 180
+ G+ L +I+HG+ +GN + ++R LL NVI VDW+ A+G LY+ A
Sbjct: 19 FRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNT 78
Query: 181 PSVGQFLGNFL 213
VG L +
Sbjct: 79 RVVGAQLAELI 89
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 255 HLIGFSLGAHVVGNAGRQAGGRPNRVT 335
HLIG SLGAHV G AG + G+ R+T
Sbjct: 104 HLIGHSLGAHVAGYAGERLSGKVGRIT 130
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 31.1 bits (67), Expect = 0.66
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = -2
Query: 362 PPGPSWIQTGNPVGSAT--SLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCP 189
PPG QT P GS + S + TDN+ + +N+ PQ+ P + K+ P
Sbjct: 579 PPGKPTDQTPKPPGSTSPNSATQGPTDNLMSAKPSNKKPTPQVVTP--SGEAKQSGPTSP 636
Query: 188 TLGTPLTAVLYRPLARPRQSTTITLQSETASKA 90
T T + +P T L ET + A
Sbjct: 637 TSQTEIPTDSSLS-TKPTVRATTQLPGETTASA 668
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 0.66
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 370 LPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKP 263
LPP + P P +PP C P P C+ L P
Sbjct: 753 LPPKVTPKPPAPPQFAPVPPPCAPIPPMPCSAPLPP 788
>SB_16790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1902
Score = 30.7 bits (66), Expect = 0.88
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 380 GLVVTTPPGPSWIQTGNPVGSATSLSSSVTDNV 282
G+ T P G WIQ +P GS LS S T V
Sbjct: 226 GIKDTNPEGDKWIQVASPPGSIIQLSVSRTGAV 258
>SB_30926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 287 NVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 141
+V + ++++R +LPPPL Q TL T +TA + P+ R
Sbjct: 183 HVAGEKRLHRLSRSRLPPPLTNPQVSGTKHAKATLTTKITASTWLPILR 231
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 455 NAVKNTEK-TTVGVDCLHISSCVTVQGLVVTTPPGPSWIQTGNPVGSATSLSSSVTDNVR 279
NA N++ TTV T T P + + TG P+G+ T + + +
Sbjct: 43 NATTNSQNITTVAPITTMAPDTTTAAPFTTTIAPATTALPTGTPIGTPTGIPTGILTGTA 102
Query: 278 AQA 270
+QA
Sbjct: 103 SQA 105
>SB_48920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 266 ANQVTRPQLPPPLLMSQTKKL---PRNCPTLGTPLTAVLYRPLAR 141
AN T+ PPL + KL PR CPT G PL VL RP R
Sbjct: 11 ANIGTKAGTGPPLEVDGIDKLDAMPRKCPTPGDPL--VLERPPPR 53
>SB_3456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Frame = -1
Query: 495 GGFCHRWGKSHHEQCGQ----KYREDHRRCG 415
GG C R+G H QC + K+ E+H CG
Sbjct: 256 GGLCSRFGTQHSCQCARGYSGKHCEEHSPCG 286
>SB_40390| Best HMM Match : BON (HMM E-Value=0.68)
Length = 561
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -3
Query: 364 PHLGPAGSKPVTLLGLPPACRPALPTTC-APKLK-PIK*LDPNCRLR 230
P GP+ P T L P RP PT C P + P L PN LR
Sbjct: 106 PCYGPSAKPPATALVPNPLLRPQCPTPCYGPSAQPPATGLVPNPLLR 152
>SB_24276| Best HMM Match : Extensin_2 (HMM E-Value=2.1e-05)
Length = 449
Score = 29.1 bits (62), Expect = 2.7
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 111 LQRYCCGLAWSCQRSIQHCRQWSSQCRTVPWQLFGLAHQQR---RRQLGSSHLIGFSL 275
L R C C + +C QW + PW+ AH+Q R G +H IGFS+
Sbjct: 331 LSRRCAEWGNLCNGAT-NCDQWGNTAFDGPWRT---AHRQAYFTNRATGETHTIGFSV 384
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 255 HLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAG 353
HL G S+G H+VG Q R V + PAG
Sbjct: 135 HLAGISMGGHIVGVYAAQHPARVASVIMMCPAG 167
>SB_57096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 28.7 bits (61), Expect = 3.5
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = -3
Query: 433 RPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKPIK* 254
R PS + S P+ RF + LP P+G P L P LP+ C P +
Sbjct: 374 RLPSRRLPSGRLPSRRFPSGRLPSRRLPSGRLPSRQLPSGPLPSGRLPSGCLPSRRLPSG 433
Query: 253 LDPNCRLRC 227
P+ RL C
Sbjct: 434 RLPSGRLPC 442
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -3
Query: 436 RRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPA--LPTTCAP 275
RR PS W+ S P+ R + LP P+G P LP P+ LP+ C P
Sbjct: 203 RRLPSGWLPSRRLPSRRLPSGRLPSRRLPSGRLPSG--RLPSRWLPSRRLPSGCLP 256
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 255 HLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAG 353
HL G S+G H+VG Q R V + PAG
Sbjct: 13 HLAGISMGGHIVGVYAAQHPARVASVIMMCPAG 45
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -3
Query: 364 PHLGPAGSKPVTLLGLPPACRPALPTTC-APKLKP 263
P GP+ P T L P RP PT C P +P
Sbjct: 436 PCFGPSAPPPATALVPNPLLRPQCPTPCYGPSAQP 470
>SB_15037| Best HMM Match : zf-LSD1 (HMM E-Value=6.5)
Length = 191
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +3
Query: 36 CPRLEQQRKLRCEHHDPPRLAGRLRLQ--RYCCGLAWSC 146
CP LR H PP GR+R+ R+C G+A C
Sbjct: 33 CPLTAIVLGLRASVHLPPLRCGRVRVSTYRHCVGVACEC 71
>SB_6592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 3.5
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -2
Query: 320 SATSLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 141
S + +++ + A A N ++ + PPPLL K L L ++ YRP
Sbjct: 193 SLQGMEPTLSSDHPALALENSQSKTEEPPPLLSEGAPKDAEVSLRLSEELPSIEYRPSGT 252
Query: 140 PRQSTTITLQS-ETASKAGRI 81
P +QS T + G I
Sbjct: 253 PEGVAAPDVQSTPTVASTGNI 273
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -3
Query: 400 APALRFRAWLLPPHLGPAGSKPVTLLGLPPACRPALPTTCAPKLKP 263
A + FRA + P PA S P+ PP + ALP AP + P
Sbjct: 1762 ASSASFRAQTVAPITQPALSSPLVAQSAPPNSQAALPV--APVIPP 1805
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 204 QLFGLAHQQRRRQLGSSHLIGFSLGAHVVGNAGRQAGGRPNRVTGL 341
+L ++Q S +IGFSLG HV G AG R TGL
Sbjct: 3 ELVKFLNKQTGNTPSSFTVIGFSLGGHVAG----YAGSRIKNTTGL 44
>SB_40186| Best HMM Match : Extensin_2 (HMM E-Value=0.0036)
Length = 362
Score = 28.3 bits (60), Expect = 4.7
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Frame = -3
Query: 487 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGP--AGSKP---VTLL 323
+P L +P M + P PP++ +T P L LPP P A + P VT
Sbjct: 129 IPFLATTAPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTS 188
Query: 322 GLPPACRPALPTT 284
LPP P L TT
Sbjct: 189 PLPPPTIPFLATT 201
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = -3
Query: 487 LPPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLL----- 323
+P L +P M + P PP++ +T P L LPP P + +LL
Sbjct: 173 IPFLATTTPLLMVTTSPLPPPTIPFLATTTPLLMVTTSPLPPPTIPFLATTTSLLMVTTS 232
Query: 322 GLPPACRPALPTTCAPKL 269
LPP P L TT AP L
Sbjct: 233 PLPPPTIPFLATT-APLL 249
>SB_39797| Best HMM Match : VWA (HMM E-Value=6e-26)
Length = 317
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 222 EPDQKVAKELSDTGNSIDGS-VV*TVGKTTPVHNNNVAVGDGQQGGADHGVHSGV 61
EPD+K KE D G ID S + + PV N VA Q + G H GV
Sbjct: 67 EPDKKPCKEAIDVGVIIDASESINNEQENFPVVLNFVANISKQYQVSQEGTHFGV 121
>SB_37360| Best HMM Match : ETS_PEA3_N (HMM E-Value=0.65)
Length = 861
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 380 GLVVTTPPGPSWIQTGNPVGSATSLSSSVTDNVRAQAEANQVT--RPQLPPP 231
G ++ PP P+ Q G V S T +NV + ++ T +PQ+P P
Sbjct: 777 GKALSEPPAPA--QGGKTVSSTTLSKEQAEENVGSPTTTDECTEQQPQIPGP 826
>SB_7778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = -2
Query: 305 SSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLARPRQST 126
S S ++VR + +++ +P +PP +S T+K R P TP + + +P RP
Sbjct: 229 SFSGKESVRKKHKSSPHKKPAVPPAPDLSLTRK--RMAPPPPTPSSGPMLKP-ERPTPVP 285
Query: 125 TITLQSETASKA 90
++ SE KA
Sbjct: 286 RKSIPSEQKQKA 297
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 282 HVVGNAGRQAGGRPNRVTGLDPAG--PRWGGNNQALNRNA 395
H GNAG Q R V+ P G P +QA NRNA
Sbjct: 106 HQCGNAGTQTRTRTKTVSEACPGGRCPYHFSESQACNRNA 145
>SB_39747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 6.2
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -2
Query: 218 QTKKLPRNCPTLGTPLTAVLYRPLARPRQS-TTITLQSET-ASKAGRIMV 75
Q LPRN P L + T V R +RP TT++ S T S+AG I V
Sbjct: 67 QRTSLPRNRPLLPSRETPVQKRNPSRPISGRTTVSALSRTPGSRAGGITV 116
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 27.5 bits (58), Expect = 8.2
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = -2
Query: 533 LDCESRY*PATRLGVSATVGVKVTMSNAVKNTEKTTV--GVDCLHISSCVTVQGLVVTTP 360
L E+ P T L +TV K TMS+ ++TTV G S+ + +V T
Sbjct: 1395 LASETTMAPKTTLAPESTVAKKTTMSSETTMAQETTVAPGTTMAPESTLASKTTMVSQTT 1454
Query: 359 PGP 351
GP
Sbjct: 1455 AGP 1457
>SB_28381| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 285 VVGNAGRQAG-GRPNRVTGLDPAGPRWGGNNQALNRNA 395
+ N G +AG G P V G+D +NQ LN+NA
Sbjct: 9 ISANIGTKAGTGPPLEVDGIDKLDEMTFDSNQLLNKNA 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,945,580
Number of Sequences: 59808
Number of extensions: 548705
Number of successful extensions: 1883
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1871
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1349364063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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