Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0576
(570 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138... 31 0.72
At2g37925.1 68415.m04655 copper transporter family protein simil... 31 0.72
At5g08230.1 68418.m00965 PWWP domain-containing protein putative... 30 1.2
At1g59940.1 68414.m06752 two-component responsive regulator / re... 29 1.7
At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family p... 29 2.2
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 29 2.2
At5g11690.1 68418.m01366 mitochondrial import inner membrane tra... 28 3.8
At2g43680.2 68415.m05430 calmodulin-binding family protein simil... 28 3.8
At2g43680.1 68415.m05429 calmodulin-binding family protein simil... 28 3.8
At1g58070.1 68414.m06581 expressed protein 28 5.0
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 28 5.0
At1g63490.1 68414.m07179 transcription factor jumonji (jmjC) dom... 27 6.7
At5g67280.1 68418.m08483 leucine-rich repeat transmembrane prote... 27 8.8
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 27 8.8
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 27 8.8
At2g16650.1 68415.m01911 expressed protein 27 8.8
>At3g07900.1 68416.m00965 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 579
Score = 30.7 bits (66), Expect = 0.72
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Frame = -2
Query: 347 WIQTGNPVGSATSLSSSVTDNVRAQAEANQVTRPQL--PPPLLMSQTKKLPRNCPTLGTP 174
W++TG + LSS + V + ++ RP+L + S +KL CP
Sbjct: 363 WVRTG----CLSGLSSKYDEIVNIE----RIKRPELLTAKSSMTSNERKLAGLCPLNAKE 414
Query: 173 LTAVLYRPLARPRQSTTITLQSETASKAGRIMVFTAEFPLLFQPWTI 33
+T +L R L PR + E + T+EFP L+ + I
Sbjct: 415 VTRLL-RALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLYNKYDI 460
>At2g37925.1 68415.m04655 copper transporter family protein similar
to SP|Q39065 Copper transporter 1 (COPT1) {Arabidopsis
thaliana}; contains Pfam profile PF04145: Ctr copper
transporter family; supporting cDNA
gi|18496855|gb|AF466372.1|
Length = 145
Score = 30.7 bits (66), Expect = 0.72
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Frame = +1
Query: 31 VIVHGWNSNGNSAVNTMIRPALLAVS-----DCNVIVVDWRGLANGLYNTAV 171
V+V WN+ + T RP+LL + +C V+ W G G+Y A+
Sbjct: 8 VVVEAWNTTTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALAL 59
>At5g08230.1 68418.m00965 PWWP domain-containing protein putative
transcription factor (HUA2) - Arabidopsis thaliana,
EMBL:AF116556
Length = 1445
Score = 29.9 bits (64), Expect = 1.2
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -3
Query: 484 PPLG*KSP*AMRSKIPRRPPSVWIAST*APALRFRAWLLPPHLGPAGSKPVTLLGLPPA- 308
PPL +SP + + P PP APA LPP P P + LPP+
Sbjct: 1126 PPLPHESPPSPPPQPPSSPPPPSSPPQLAPAPPPSDHCLPPPTAPLA--PAQSIALPPSS 1183
Query: 307 -CRPALPTTCAPKLKP 263
RP++P+ + L+P
Sbjct: 1184 ITRPSMPSHPSLPLQP 1199
>At1g59940.1 68414.m06752 two-component responsive regulator /
response regulator 3 (ARR3) identical to response
regulator 3 GI:3953595 from [Arabidopsis thaliana]
Length = 231
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -2
Query: 308 LSSSVTDNVRAQAEANQ--VTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAV 162
L S +T +V+ AE N+ +T P PPPL S T + + T+ +PL+ V
Sbjct: 156 LRSYLTRDVKVAAEGNKRKLTTPPPPPPL--SATSSMESSDSTVESPLSMV 204
>At5g42560.1 68418.m05180 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 296
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -2
Query: 320 SATSLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRPLAR 141
S +S SSS + +V+ P P P + S P+N T +V P+
Sbjct: 181 SLSSSSSSSSSENEGNEPTRKVSGPSRPRPTVTSVPAADPKNAGTTQIAQKSVA-SPIVN 239
Query: 140 PRQSTT 123
P QSTT
Sbjct: 240 PPQSTT 245
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 64 SAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSVGQFLGNFLV-----WLIN 228
SA+N+++ A +AV+ V+ W+ LA ++ VP V +F+G F + WL
Sbjct: 181 SAINSLVMCASVAVTYLLGSVISWQKLA------LISTVPCVFEFVGLFFIPESPRWLSR 234
Query: 229 NG 234
NG
Sbjct: 235 NG 236
>At5g11690.1 68418.m01366 mitochondrial import inner membrane
translocase subunit Tim17, putative similar to SP|Q9SP35
Mitochondrial import inner membrane translocase subunit
TIM17 {Arabidopsis thaliana}; contains Pfam profile
PF02466: Mitochondrial import inner membrane translocase
subunit Tim17
Length = 133
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 261 IGFSLGAHVVGNAGRQ-AGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLL 437
IG++ GA VG + G N P G R+ G QA + NA GGLL
Sbjct: 19 IGYAFGAGAVGGSVYHFVRGAYN-----SPIGARYVGGTQAASMNAPRLGGTFAVFGGLL 73
Query: 438 GIFD 449
FD
Sbjct: 74 STFD 77
>At2g43680.2 68415.m05430 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 669
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 430 PPSVWIAST*APALRFRAWLLP-PH-LGPAGSKPVTLLGLPPACRPALPTTCAPK 272
PP++ AST P+ R +P P P G+ P + PP+ R PT P+
Sbjct: 175 PPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPTLDTPR 229
>At2g43680.1 68415.m05429 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 668
Score = 28.3 bits (60), Expect = 3.8
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -3
Query: 430 PPSVWIAST*APALRFRAWLLP-PH-LGPAGSKPVTLLGLPPACRPALPTTCAPK 272
PP++ AST P+ R +P P P G+ P + PP+ R PT P+
Sbjct: 174 PPTLRPASTRVPSQRITPHSVPSPRPSSPRGASPQAISSKPPSPRAEPPTLDTPR 228
>At1g58070.1 68414.m06581 expressed protein
Length = 284
Score = 27.9 bits (59), Expect = 5.0
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 329 PVGSATSLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKL--PRNCPTLGTPLTAVLY 156
PV + T S S + + A NQ +P+ P +SQT KL P P++ TA L
Sbjct: 40 PVQTHTMNSKSASP-IAASRSINQNAKPRSPG---LSQTVKLVIPTASPSISQ--TAKLV 93
Query: 155 RPLARPRQSTTITLQS 108
P+A P S T + S
Sbjct: 94 SPIASPSISQTASSSS 109
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 27.9 bits (59), Expect = 5.0
Identities = 30/136 (22%), Positives = 48/136 (35%)
Frame = -2
Query: 509 PATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSWIQTGN 330
P T + V T S + T T + L SS V + P T
Sbjct: 406 PLTSVKVDLNQAAPSTPSPSPGPTAGFTFNLPALSPSSPEMVSSSTGQSSLFPPSAPTSQ 465
Query: 329 PVGSATSLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKKLPRNCPTLGTPLTAVLYRP 150
S +SS+TD+ R + + + P + PP + + P+ P+T + P
Sbjct: 466 VSSDQASATSSLTDSSRLFSSTSLSSTPPITPPDAFQSPQV---STPSSAVPITEPVSEP 522
Query: 149 LARPRQSTTITLQSET 102
QS++I T
Sbjct: 523 KKPEAQSSSILSTQST 538
>At1g63490.1 68414.m07179 transcription factor jumonji (jmjC)
domain-containing protein similar to PLU-1 protein
(GI:4902724) [Homo sapiens] and PLU1 (GI:22726257) [Mus
musculus]; similar to Retinoblastoma-binding protein 2
(RBBP-2) (SP:P29375) {Homo sapiens}; contains Pfam
PF02373: jmjC domain
Length = 1116
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Frame = -2
Query: 488 SATVGVKVTMSNAVKNTEKTTVGVDCLHISSCVTVQGLVVTTPPGPSWIQTGNPVGSAT- 312
++T+ T +K+ + +V +D + T+QG+ T +W+Q P SAT
Sbjct: 733 ASTILENETQMYELKDLVRMSVNIDAV----LPTLQGIENTISSAETWLQKSEPFLSATS 788
Query: 311 SLSSSVTDNVRAQAEANQVTRPQL 240
S++SS + + VT+ +L
Sbjct: 789 SMASSPCSMLELPVLKDLVTQAKL 812
>At5g67280.1 68418.m08483 leucine-rich repeat transmembrane protein
kinase, putative
Length = 751
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 249 SSHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAG 353
SS+LI SL +H GN R NR++G P+G
Sbjct: 201 SSNLIKGSLPSHFRGNRLRYFNASYNRISGEIPSG 235
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.1 bits (57), Expect = 8.8
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 365 TPPGPSWIQTGNPVGSATSLSSSVTDNVRAQAEANQVTRPQLPPPLLMSQTKK--LPRNC 192
TP PS + + G+ATS +DNV A+ + +P PP + + KK LPR
Sbjct: 636 TPTNPSKTVSVDFFGAATSPHLGASDNV-----ASNLGQPARSPPPISNSDKKPALPRPP 690
Query: 191 P 189
P
Sbjct: 691 P 691
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 81 DPPRLAGRLRLQRYCCGLAWSCQRSIQHCRQWSSQCRT 194
D P L ++YC G + SC+ + C SQCR+
Sbjct: 620 DCPCLTNETCCEKYC-GCSKSCKNRFRGCHCAKSQCRS 656
>At2g16650.1 68415.m01911 expressed protein
Length = 511
Score = 27.1 bits (57), Expect = 8.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 12 WKPASLCYCPRLEQQRKLRCEHH 80
+ PA LC+C +LE ++ E H
Sbjct: 149 YAPALLCFCEKLEAEKGYEVEEH 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,270,444
Number of Sequences: 28952
Number of extensions: 384376
Number of successful extensions: 1373
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1365
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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