Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0575
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.4  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.6  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.4  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   9.8  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 450 YLAFSNDGVNFRKYEGNPVLPTCPTIQ 530
           +L ++ D ++  K +G P+LP   T+Q
Sbjct: 503 FLQYAQDLISDAKVKGRPILPLLKTVQ 529


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = +2

Query: 578 VVIGSSSNKRGRVLLYRSGDLFNWEFL 658
           +V+G + ++R RVLL  + ++ NWE +
Sbjct: 265 MVLGQTQDQRQRVLLNVAKEVPNWEII 291



 Score = 23.8 bits (49), Expect = 5.6
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
 Frame = +3

Query: 285 VSSSNLIDWEHLPTALIPETEMCFSGGAVVHGDDLVLLYTGRVTTDTDP-FYNETQYL-- 455
           VS   L     +PTA + + +     G+   G   V  +   + TD DP  YN+T     
Sbjct: 309 VSKKCLFGEAWVPTAGLQDVKTALVNGSAAVGS-AVPSFLNIIATDEDPPTYNKTNKFTR 367

Query: 456 AFSN--DGVNFRKY-EGNPVLPTCPTIQLI 536
            F N  +      Y E NP L T  T   +
Sbjct: 368 GFQNLIESYGIATYREANPALYTIITFPFL 397


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 669 ENQTATWATCGNVPI 713
           E+Q A   TCGN+PI
Sbjct: 50  EDQLAAIVTCGNLPI 64


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 370  SSTEMTWYCYTRAASL 417
            +STE+ WYC  +A  +
Sbjct: 1014 ASTELNWYCSKKAKDM 1029


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 353 AHFGFRDESRREVFPVDQVAT 291
           A+ G+RD S RE+ P+   AT
Sbjct: 48  ANVGYRDGSTREIDPLGARAT 68


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,246
Number of Sequences: 2352
Number of extensions: 17314
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)