Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0575
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39852-3|ABN43083.1|  211|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U46753-7|AAA85763.2|  223|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL021482-1|CAA16338.1|  385|Caenorhabditis elegans Hypothetical ...    29   3.4  
U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    28   6.0  

>U39852-3|ABN43083.1|  211|Caenorhabditis elegans Hypothetical
           protein K10C2.8 protein.
          Length = 211

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +1

Query: 76  QNETTKRELEEYIADKKAEINPRYRP-HYHISPPVG 180
           + E ++++LEE +A  K+ ++PRYR   Y+++ P G
Sbjct: 36  ETEQSQKQLEECVASGKSVMDPRYRGIMYNLTTPEG 71


>U46753-7|AAA85763.2|  223|Caenorhabditis elegans Hypothetical
           protein C34F11.8 protein.
          Length = 223

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 118 DKKAEINPRYRPHYHISPPVGWMNDPNGFSYYKEKFHLFYQFYP 249
           +++A+  P Y  HYH +P  G+    +G+  Y         +YP
Sbjct: 121 EERADSGPDYHYHYHEAPRYGYSRYGDGYGRYGPYSGYGNSYYP 164


>AL021482-1|CAA16338.1|  385|Caenorhabditis elegans Hypothetical
           protein Y39A1B.1 protein.
          Length = 385

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 384 DLVLLYTGRVTTDTDPFYNETQYLAFSNDGVNFRKYEGNPVLP 512
           D VL   G +TT T P+Y     L++SN    + +  G P++P
Sbjct: 289 DFVLQVIGNITTFTQPYYIG---LSYSNGNWQWDQPNGQPLIP 328


>U61952-4|AAK84529.1|  267|Caenorhabditis elegans Hypothetical
           protein F42A9.7 protein.
          Length = 267

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 79  NETTKRELEEYIADKKAEINPRYRPHYHISPPVGWM 186
           N +++++L  +  +K + +N R  PH  I PP+G M
Sbjct: 136 NNSSEKQLNAHNDNKISYVNVRVIPHELIFPPIGGM 171


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
           protein Y8A9A.2 protein.
          Length = 1360

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/46 (28%), Positives = 19/46 (41%)
 Frame = +3

Query: 567 IIGMLSLAAQAINGEECSFTDQGICLIGSFCRSWENQTATWATCGN 704
           I G +  A    +   C+ T    C++G     W +  A   TCGN
Sbjct: 783 ICGPVEAAEDETDPVPCTTTTPACCVLGGVWSEWSSGDACNDTCGN 828


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,612,620
Number of Sequences: 27780
Number of extensions: 361233
Number of successful extensions: 905
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)