Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0574
(471 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 46 2e-05
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 46 2e-05
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 43 1e-04
SB_19382| Best HMM Match : rve (HMM E-Value=8.4e-26) 29 1.5
SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7) 28 3.4
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 4.5
SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.9
SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 27 7.8
SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28) 27 7.8
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/69 (37%), Positives = 34/69 (49%)
Frame = +2
Query: 260 IRSXFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHL 439
IR + +D NVI DW R A Y A A VG + + +L N G +L
Sbjct: 632 IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691
Query: 440 IGFSLGAHV 466
+GFSLGAH+
Sbjct: 692 VGFSLGAHI 700
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = +3
Query: 84 RSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNLSS 263
R G N + LFT V+ + +++ ++ S Y + T++IVHG+ + + +
Sbjct: 483 RVGTN--FRLFTRSNPLISNVIDDSDVSKLQASRYDGKKRTIIIVHGFIEHDSVPCPPVT 540
Query: 264 DPXSLP 281
+ S+P
Sbjct: 541 EHSSVP 546
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/60 (43%), Positives = 30/60 (50%)
Frame = +2
Query: 287 DVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHV 466
D NVI+VDW R A + A A VG L L +G VH+IGFS GAHV
Sbjct: 143 DFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIGFSFGAHV 202
Score = 30.3 bits (65), Expect = 0.84
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 81 SRSGANNQYWLFTXXXXXXXXVLVNGNINSVRNSHYRANRGTVVIVHGW 227
S + + Q+ L+T L +++ R++H+ A+R TV+I+HG+
Sbjct: 67 SPASIHTQFMLYTRESPVQYQQLYE-DMDITRDTHFNASRRTVIIIHGF 114
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 260 IRSXFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRALGNFLVWLINNAGG-NWNQVH 436
++ L D NVI+VDW R A Y A A VG + F+ +++ +G H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174
Query: 437 LIGFSLGAHV 466
IGFSLGAH+
Sbjct: 175 SIGFSLGAHI 184
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 42.7 bits (96), Expect = 1e-04
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 257 LIRSXFLAVQDVNVIVVDWHRLAN--SNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQ 430
++R L + +NVI VDW A+ + Y+ AA VG L + + + +
Sbjct: 43 VMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRR 102
Query: 431 VHLIGFSLGAHV 466
VHLIG SLGAHV
Sbjct: 103 VHLIGHSLGAHV 114
>SB_19382| Best HMM Match : rve (HMM E-Value=8.4e-26)
Length = 684
Score = 29.5 bits (63), Expect = 1.5
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 146 ACERQHQLREEFTLPRQPRYRCHRPRMEQQWQH-PDEPLIRSXFLA---VQDVNVIVVDW 313
+CE+++ E+ PR R+R R QH P + LI + L+ V++ + +
Sbjct: 182 SCEQRYAQSEKEGPPRVQRFRMRLMRFHYSIQHIPGKDLIMADMLSRAPVENRDGQEENL 241
Query: 314 HRLANSNYNTAAAGVPDVGRALGN 385
H ++ + AG+P R L N
Sbjct: 242 HEVSQEFVDHVIAGLPATNRQLDN 265
>SB_35417| Best HMM Match : DTHCT (HMM E-Value=1.7)
Length = 357
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 155 RQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEP 256
++HQL+ + QP+ R H+P+ +Q H +P
Sbjct: 317 KRHQLQLQQPRSHQPQPRSHQPQPQQPRSHQPQP 350
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 153 NGNINSVRNSHYRANRGTVVIVHGWNNNGNTQMNLSSDPXS 275
N NINS RNS+ +N + NNN N+ N++S+ S
Sbjct: 116 NNNINSNRNSNSSSNSNS-----NSNNNSNSNNNINSNSNS 151
>SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 89 RRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQ 196
RR S +FH++E K G + +H+L FTLP Q
Sbjct: 343 RRSYSHSSFHRSECKPRRGHIQVKHKLGCVFTLPSQ 378
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 187 TAPTEVPLSSSTDGTTMATPR 249
T PT VP + ST TT TPR
Sbjct: 138 TTPTTVPTTLSTTATTATTPR 158
>SB_25851| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 683
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 128 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPLIR 265
P S C+R+ +E + R+PR HRP+ + + P R
Sbjct: 490 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPKKPTRRPRKNSPRTR 535
>SB_22132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 125 EPKQSPGACERQHQ--LREEFTLPRQPRYRCHRPRMEQQWQHPD 250
+ +Q P ++Q Q L+++ PR + + +PR++QQ QH D
Sbjct: 107 QQQQQPRLKQQQQQPRLQQQQQQPRLKQQQQQQPRLKQQQQHHD 150
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 119 QTEPKQSPGACERQHQ---LREEFTLPRQPRYRCHRPRMEQQWQHP 247
Q + +Q P ++Q Q L+++ PR + + +PR++QQ Q P
Sbjct: 76 QQQQQQQPRLKQQQQQQPRLKQQQQQPRLKQQQQQQPRLKQQQQQP 121
>SB_3353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 128 PKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPLIR 265
P S C+R+ +E + R+PR HRP+ + + P R
Sbjct: 127 PWSSNKDCDRERNSVKEISTTRRPRKSTHRPKKPTRRPRKNSPRTR 172
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 260 IRSXFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVG 370
+R L DVNV++ DW A+ Y A A VG
Sbjct: 123 MRQALLQKDDVNVVITDWGPGADGMYWQATANTRLVG 159
>SB_43631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1157
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 82 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 249
P P+ +P+R TIA +ATST GI T+ E S S T +TP+
Sbjct: 823 PVGEPVFKPCVTPNRPATIAST--SATSTSFGISTSTYQESSNSESA-STFQSTPQ 875
>SB_40905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 144 PGDCFGSVW*K-ASTDYWRRFWSPVIHSRWVHAG 46
PGD FGS W + S DY+ SP + +R H G
Sbjct: 85 PGDRFGS-WDRFESRDYFESCTSPRVTNRQTHGG 117
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 43 WTCMNPSTMNYWAPEAAPIISTGFSPDRTKTIARC 147
W + S + +AP++ F PD +KTI C
Sbjct: 462 WEWEDRSLLTQSKELSAPVLDIAFDPDDSKTIVSC 496
>SB_39385| Best HMM Match : 7tm_1 (HMM E-Value=2.9e-28)
Length = 360
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -3
Query: 253 FIWVLPLLFHPWTMTTVPRLAR*CEFLTELMLPFTSTWRLFWFCLVKSQY*LLAP 89
FI +P L +TT+ C F+T ++ F TW F + ++ +AP
Sbjct: 153 FILAVPTLVFK-DLTTLSAYTAFCAFITLILPSFIITWTYFEIVKISKRHARIAP 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,001,323
Number of Sequences: 59808
Number of extensions: 332691
Number of successful extensions: 2411
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2404
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 982083920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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