Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0574
         (471 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35639-8|CAI46560.1|  634|Caenorhabditis elegans Hypothetical pr...    30   0.73 
Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical pr...    30   0.73 
AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.      30   0.73 
AF078783-6|AAC26923.1|  473|Caenorhabditis elegans Hypothetical ...    30   0.73 
Z83239-2|CAB05802.1|  182|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z78416-8|CAB01683.2|  588|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z75955-2|CAB00112.1|  355|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z69717-4|CAA93533.2|  588|Caenorhabditis elegans Hypothetical pr...    27   5.1  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    27   6.8  
Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical pr...    27   9.0  
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    27   9.0  
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical...    27   9.0  

>Z35639-8|CAI46560.1|  634|Caenorhabditis elegans Hypothetical
           protein D2045.1b protein.
          Length = 634

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
 Frame = +2

Query: 128 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 253
           P+Q+P GA ++++Q  + + +P     +QPRY+   P  +QQ Q P +
Sbjct: 351 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 398


>Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical
           protein D2045.1a protein.
          Length = 959

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
 Frame = +2

Query: 128 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 253
           P+Q+P GA ++++Q  + + +P     +QPRY+   P  +QQ Q P +
Sbjct: 676 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 723


>AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.
          Length = 959

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
 Frame = +2

Query: 128 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 253
           P+Q+P GA ++++Q  + + +P     +QPRY+   P  +QQ Q P +
Sbjct: 676 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 723


>AF078783-6|AAC26923.1|  473|Caenorhabditis elegans Hypothetical
           protein H10E21.5 protein.
          Length = 473

 Score = 30.3 bits (65), Expect = 0.73
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 163 STP*GIHTTAPTEVPLSSSTDGTTMATPR*TSHQI 267
           S P  I  T  T +P +SST GTTM T   T+  +
Sbjct: 438 SLPTPIEITTSTVIPATSSTSGTTMTTATATNSHV 472


>Z83239-2|CAB05802.1|  182|Caenorhabditis elegans Hypothetical
           protein T09F5.2 protein.
          Length = 182

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 471 PTT*APRLKPIRCTWFQLPPALLMSQTKKLPRARPTSGTPAAAVL 337
           P++ +P       T  +LPP +    T  + R+ P++ TPA  +L
Sbjct: 101 PSSISPAPDKTEPTSSELPPTITKELTAAISRSEPSTSTPAPTIL 145


>Z70208-11|CAA94144.1|  598|Caenorhabditis elegans Hypothetical
           protein F54B11.11 protein.
          Length = 598

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +1

Query: 94  PIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATP 246
           PI+ST  +   TKT+       T+    + TTA T  P  +S   TT  TP
Sbjct: 474 PILST-MTSSTTKTLTSTTTITTTKANILTTTATTTTPPVTSAPATTFITP 523


>Z78416-8|CAB01683.2|  588|Caenorhabditis elegans Hypothetical
           protein E01G6.3 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +2

Query: 401 INNAGGNWNQVHLIGFSLGAHV 466
           I+N GG+ + ++L+G S GAH+
Sbjct: 192 ISNFGGHKDDINLMGHSAGAHI 213


>Z75955-2|CAB00112.1|  355|Caenorhabditis elegans Hypothetical
           protein R07B7.3 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 134 QSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPLIRS 268
           Q+P A +R  +  + F   +QPR++   PR ++Q Q   + ++RS
Sbjct: 267 QTPVAQQRFQRQPQRFQ-QQQPRFQQQPPRFQRQQQPQQQQVVRS 310


>Z69717-4|CAA93533.2|  588|Caenorhabditis elegans Hypothetical
           protein E01G6.3 protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +2

Query: 401 INNAGGNWNQVHLIGFSLGAHV 466
           I+N GG+ + ++L+G S GAH+
Sbjct: 192 ISNFGGHKDDINLMGHSAGAHI 213


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 139 ARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TS 258
           A C  T+T+T     TT PT    +++T  TT  TP  T+
Sbjct: 60  ADCTTTSTTTTSTTTTTTPTTPTTTTTTPTTTTTTPTTTT 99



 Score = 27.1 bits (57), Expect = 6.8
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +1

Query: 118 PDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TSHQIRLP 276
           P  T T      T T+TP    TT  T    +++T  TT  TP  T+     P
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKP 269


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 187 TAPTEVPLSSSTDGTTMATPR*TSHQIRLPCRSRREC 297
           T P ++ +S ST+GT        S  +R+P R+ R C
Sbjct: 620 TKPYKLTVSYSTEGTVADFLSVVSETVRVPTRNLRAC 656


>Z99288-7|CAB63421.1|  362|Caenorhabditis elegans Hypothetical
           protein ZK262.8 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 188 PRQPRYRCHRPRMEQQWQHPDEPLIRSXFLAV 283
           P   +   H PR+  + QHP  P IR  F AV
Sbjct: 43  PDNRKRALHHPRLRFRCQHPRFPPIRVLFQAV 74


>Z82264-7|CAB05164.3|  499|Caenorhabditis elegans Hypothetical
           protein C49C3.13 protein.
          Length = 499

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +1

Query: 43  WTCMNPSTMNYWAPEAA--PIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSS 216
           +TC + +T++  +      P  +T      T T      T T+TP    TT  T    S+
Sbjct: 243 YTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTEST 302

Query: 217 STDGTTMATPR*TS 258
           +T+ T+  TP  T+
Sbjct: 303 TTETTSTTTPTTTT 316


>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 146 ACERQHQLREEFTLPRQPRY---RCHRPRMEQQWQHPDEPLIRSXFLAVQDVNVIVVDWH 316
           A  +  +L E  + PR+  Y   +  +PR++ +++     ++     A Q++NV + +  
Sbjct: 607 ALNKIDRLYEYESNPRKDVYELLKSQKPRVQAEFKERFNQIVVE--FAEQELNVTLSNHK 664

Query: 317 RLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVV 469
              +S+Y         +G  +GN + ++IN     + Q       L A V+
Sbjct: 665 NAEDSDYVCMVPTSAFLGDGIGNLMAFIINQTQTKYAQKLAFSEELDATVM 715


>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
            protein Y54F10BM.2 protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 23/111 (20%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
 Frame = +2

Query: 146  ACERQHQLREEFTLPRQPRY---RCHRPRMEQQWQHPDEPLIRSXFLAVQDVNVIVVDWH 316
            A  +  +L E  + PR+  Y   +  +PR++ +++     ++     A Q++NV + +  
Sbjct: 727  ALNKIDRLYEYESNPRKDVYELLKSQKPRVQAEFKERFNQIVVE--FAEQELNVTLSNHK 784

Query: 317  RLANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVV 469
               +S+Y         +G  +GN + ++IN     + Q       L A V+
Sbjct: 785  NAEDSDYVCMVPTSAFLGDGIGNLMAFIINQTQTKYAQKLAFSEELDATVM 835


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,629,321
Number of Sequences: 27780
Number of extensions: 242203
Number of successful extensions: 773
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)