Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0574
         (471 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.10 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.54 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.6  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   2.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.0  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    21   8.8  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    21   8.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.10
 Identities = 19/74 (25%), Positives = 34/74 (45%)
 Frame = +2

Query: 119  QTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPLIRSXFLAVQDVNV 298
            Q   +Q P   ++Q Q ++     +QP+ +  +P+ +QQ Q   +P  +        V+ 
Sbjct: 1498 QKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGA--VSG 1555

Query: 299  IVVDWHRLANSNYN 340
            +VV   R  NS  N
Sbjct: 1556 LVVQLQRGYNSGNN 1569



 Score = 24.2 bits (50), Expect = 0.71
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 154 TATSTP*GIHTT-APTEVPLSSSTDGTTMATP 246
           T  STP  + TT A T +P +S+T GT  ATP
Sbjct: 211 TDASTPATVTTTGATTTLPAASAT-GTGPATP 241



 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 229 TTMATPR*TSHQIRLPCR 282
           T + TP   S  IRLPCR
Sbjct: 375 TILTTPGLDSDGIRLPCR 392



 Score = 21.4 bits (43), Expect = 5.0
 Identities = 11/55 (20%), Positives = 26/55 (47%)
 Frame = +2

Query: 71  ITGLQKRRQ*SVLAFHQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQ 235
           + G Q +     L  HQ+   Q+    + Q Q +++   P+Q + +  + + +Q+
Sbjct: 802 VNGDQSQPPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQR 856


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 180 SHYRANRGTVVIVHGW 227
           S YR   GTVV++H W
Sbjct: 409 SGYRLTAGTVVLLHTW 424


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/47 (19%), Positives = 22/47 (46%)
 Frame = +2

Query: 116 HQTEPKQSPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEP 256
           HQ + +Q+      Q   +++    +Q + +  + + +Q W   +EP
Sbjct: 424 HQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQHWPMEEEP 470


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 195 NRGTVVIVHGWNNNG 239
           +RG V I+ GW  NG
Sbjct: 117 HRGLVSIIDGWELNG 131


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 140 PGACERQHQLREEFTLPRQPRYRC 211
           P AC  +H++R    +P    + C
Sbjct: 519 PSACRPRHEIRSTDVIPGTQEHVC 542


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 163 MLPFTSTWRLF 131
           +LPF++TW +F
Sbjct: 118 VLPFSATWEVF 128


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 6   IWMPDGEGVPQLVDLHEPI 62
           I+ PD E      DL +PI
Sbjct: 50  IYAPDAEAYTLFADLFDPI 68


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 6   IWMPDGEGVPQLVDLHEPI 62
           I+ PD E      DL +PI
Sbjct: 66  IYAPDAEAYTLFADLFDPI 84


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,000
Number of Sequences: 438
Number of extensions: 3163
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)