Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0573
(396 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 146 2e-34
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 135 3e-31
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 128 3e-29
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 126 2e-28
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 120 8e-27
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 111 4e-24
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 105 2e-22
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 103 1e-21
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 98 5e-20
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 94 8e-19
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 92 4e-18
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 87 1e-16
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 84 1e-15
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 83 1e-15
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 75 5e-13
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 73 2e-12
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 72 5e-12
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 67 1e-10
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 52 4e-06
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 49 4e-05
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 44 8e-04
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 43 0.002
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 39 0.040
UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1; Meth... 37 0.16
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 33 2.7
UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genom... 33 2.7
UniRef50_A5Y2D7 Cluster: Concanavalin A-like lectin/glucanase; n... 32 4.6
UniRef50_Q4Q1C6 Cluster: Putative uncharacterized protein; n=3; ... 32 4.6
UniRef50_Q49HL2 Cluster: SA1_PKSA; n=65; cellular organisms|Rep:... 31 6.1
UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finge... 31 8.1
UniRef50_Q0CZR5 Cluster: Predicted protein; n=3; Trichocomaceae|... 31 8.1
UniRef50_Q9UL01 Cluster: Dermatan-sulfate epimerase precursor; n... 31 8.1
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 146 bits (353), Expect = 2e-34
Identities = 66/83 (79%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GR+K GRGH + VRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY
Sbjct: 1 MTKKRRNNGRSKKGRGHTRPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYE 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLYAKLHYCVSCA +K+
Sbjct: 61 GYPLPKLYAKLHYCVSCAIHSKV 83
Score = 38.7 bits (86), Expect = 0.040
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPKSNFPRDMSRP 347
IHSKVVRNRS++ R+ RTPP P M +P
Sbjct: 79 IHSKVVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 135 bits (326), Expect = 3e-31
Identities = 60/83 (72%), Positives = 69/83 (83%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 32.3 bits (70), Expect = 3.5
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ + RTPP
Sbjct: 79 IHSKVVRNRSREACKDRTPP 98
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 128 bits (310), Expect = 3e-29
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT KRRNGGR KH RGHV +RC+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 202 MFQLPKLYAKLHYCVSCA 255
+ LPKLYAK YCVSCA
Sbjct: 61 GYTLPKLYAKTQYCVSCA 78
Score = 33.9 bits (74), Expect = 1.1
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 359
IHS VVR RS+ +RR+RTPP R P+ Q
Sbjct: 79 IHSHVVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 126 bits (303), Expect = 2e-28
Identities = 57/99 (57%), Positives = 73/99 (73%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M +KR + GR K GRGHVK VRC NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKLSGTDRRKTEESVLLPR 318
+ LPK Y KLHYCVSCA A++ R+ ++ P+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 120 bits (290), Expect = 8e-27
Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 4/93 (4%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT KRRN GR+K GRGH + VRC++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S
Sbjct: 1 MTSKRRNNGRSKKGRGHTQNVRCSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALT 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL----SGTDRR 288
++LPK Y KL YCVSC ++ S TDRR
Sbjct: 61 KYKLPKTYMKLEYCVSCGIHGRVVRVRSRTDRR 93
Score = 33.1 bits (72), Expect = 2.0
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQ 359
IH +VVR RS+ DRR R PPK + ++ QAV+
Sbjct: 79 IHGRVVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 111 bits (268), Expect = 4e-24
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 198
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 105 bits (253), Expect = 2e-22
Identities = 50/80 (62%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Frame = +1
Query: 37 RNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLP 216
RN RAK G H++ +RCTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LP
Sbjct: 1 RNNNRAKKGHSHMQRIRCTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLP 60
Query: 217 K--LYAKLHYCVSCASTAKL 270
K LY KL+YCV CA K+
Sbjct: 61 KLYLYVKLNYCVRCAIHGKV 80
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 103 bits (247), Expect = 1e-21
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M KRRN GR+K RGH + V C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y
Sbjct: 1 MPVKRRNHGRSKMNRGHTRTVNCMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQ 60
Query: 202 MFQLPKLYAKLHYCVSCA 255
++LPK Y K +YCVSCA
Sbjct: 61 GYELPKTYQKQYYCVSCA 78
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 98.3 bits (234), Expect = 5e-20
Identities = 46/85 (54%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M KRRN GR K +GH VRCTNC R V KDKAIK+F RN+V+A++ RDI + Y
Sbjct: 1 MPSKRRNNGRNKKNKGHADTVRCTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYA 60
Query: 202 M--FQLPKLYAKLHYCVSCASTAKL 270
F +PK+Y KL YCVSCA A++
Sbjct: 61 QSDFTMPKIYVKLSYCVSCAIHARI 85
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 94.3 bits (224), Expect = 8e-19
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +1
Query: 52 AKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 231
AK G GHV+ V C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY K
Sbjct: 12 AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVK 70
Query: 232 LHYCVSCA 255
LHYCVSCA
Sbjct: 71 LHYCVSCA 78
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 91.9 bits (218), Expect = 4e-18
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
Frame = +1
Query: 22 MTRKRRNGGRAK--HGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS- 192
MT KRRN GR+K H RG VK + C NC R PKDKA+ +FV+R +++AA+ RD+ +AS
Sbjct: 1 MTTKRRNHGRSKPAHSRGRVKPIHCFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASP 60
Query: 193 VY-PMFQLPKLYAKLHYCVSCA 255
VY F +PKLY K +C++CA
Sbjct: 61 VYGANFPMPKLYMKQRFCIACA 82
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 87.0 bits (206), Expect = 1e-16
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M KRRN GR++ RGH + V CTNC R V KDKA+K++ +R++V+ ++ RDI +
Sbjct: 79 MPVKRRNAGRSQKNRGHTRTVPCTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFE 138
Query: 202 MFQ--LPKLYAKLHYCVSCA 255
+ +PKLY KL YC+SCA
Sbjct: 139 NEKQGIPKLYVKLQYCISCA 158
Score = 33.1 bits (72), Expect = 2.0
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPKSN 323
IHS+VVR R +DRRIR PP N
Sbjct: 159 IHSRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 83.8 bits (198), Expect = 1e-15
Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 4/94 (4%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GR+K RG V+ + C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y
Sbjct: 1 MTKKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYE 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL----SGTDRRK 291
+ +PKLY K + + A ++ S DR+K
Sbjct: 61 YYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKK 94
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 83.4 bits (197), Expect = 1e-15
Identities = 34/79 (43%), Positives = 53/79 (67%)
Frame = +1
Query: 34 RRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL 213
RRN GR K RG +++C C PKDKAIK+F I++++E A+ D+ A++Y +F++
Sbjct: 2 RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEV 61
Query: 214 PKLYAKLHYCVSCASTAKL 270
P++ K +CVSCA AK+
Sbjct: 62 PRMGYKSQFCVSCACHAKI 80
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 74.9 bits (176), Expect = 5e-13
Identities = 34/90 (37%), Positives = 54/90 (60%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M +KRRN GR+K+ RGHV + C + VP+DKAIKK ++++ ++D + V P
Sbjct: 1 MVKKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLP 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKLSGTDRRK 291
++ PKLY+ + Y +S A + K R+K
Sbjct: 61 GYKAPKLYSYVFYSISSAFSQKFIKPGRKK 90
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 72.9 bits (171), Expect = 2e-12
Identities = 30/66 (45%), Positives = 48/66 (72%)
Frame = +1
Query: 73 VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 252
VK V C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 127 VKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSISA 186
Query: 253 ASTAKL 270
A +K+
Sbjct: 187 AIHSKV 192
Score = 35.5 bits (78), Expect = 0.38
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPK 317
IHSKVVR RS++ RRIR PPK
Sbjct: 188 IHSKVVRVRSREARRIRDPPK 208
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 71.7 bits (168), Expect = 5e-12
Identities = 32/36 (88%), Positives = 34/36 (94%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 362
IHSKVVRNRSKKDRRIRTPPK+ FPRDM+RPQ VQR
Sbjct: 46 IHSKVVRNRSKKDRRIRTPPKNTFPRDMARPQNVQR 81
Score = 62.1 bits (144), Expect = 4e-09
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = +1
Query: 151 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCASTAKLSGTDRRKTEESVLLP 315
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCA +K+ +R K + + P
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVV-RNRSKKDRRIRTP 64
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 66.9 bits (156), Expect = 1e-10
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 64 RGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 234
R +V+ + NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 34 RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 52.0 bits (119), Expect = 4e-06
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Frame = +1
Query: 28 RKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMF 207
+KR+N GR K +G V C NC + +P+ KA++ V + + +++
Sbjct: 7 KKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI--- 63
Query: 208 QLPKLYAKLHYCVSCA---STAKLSGTDRRKTEESVL 309
+P+ Y YCV+CA K+ D RK+++ +L
Sbjct: 64 -VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKPIL 99
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 48.8 bits (111), Expect = 4e-05
Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 28 RKRRNGGRAKHGR--GHVKAVRCT-NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 198
R RR+ G+ K GR G + V+ N C+ KDKA KFVI+NIVEAAA+R
Sbjct: 3 RMRRDEGKGKKGRSQGLLWPVKAAANFTGCMTKDKA-NKFVIQNIVEAAAIR-------- 53
Query: 199 PMFQLPKLYAKLHYCVSCASTAKL 270
Y KLH CVSCA K+
Sbjct: 54 -------FYVKLHCCVSCAIHIKV 70
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 44.4 bits (100), Expect = 8e-04
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI-NDASVY 198
M +KR + GR K +G V+C NC R VP DKAI + + V+ ++ ++
Sbjct: 1 MPKKRESRGRRKGAKGKAGTVQCDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAII 60
Query: 199 PMFQLPKLYAKLHYCVSCA 255
+ + K YCVSCA
Sbjct: 61 MRYPVTKC-----YCVSCA 74
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
M +KR+N GR K +G + C NC + +P+ KA++ V + V R++
Sbjct: 1 MPKKRKNRGRKKGDKGREPYLHCDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI- 59
Query: 202 MFQLPKLYAKLHYCVSCA 255
+ + YC++CA
Sbjct: 60 ---ISRYLVTKTYCINCA 74
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 38.7 bits (86), Expect = 0.040
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = -1
Query: 198 VYRGIVNISDRRRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLGASSITALTSH 22
V RG ISD F DV + DGLVLW+ V S +VT+++L ++ ++L H
Sbjct: 71 VDRGFRQISDSSSFNDVSDSHSLDGLVLWNRSGTVDTSDRLDVTSTLLVSTVGSSLLWH 129
>UniRef50_Q8TZ16 Cluster: Zn-ribbon containing protein; n=1;
Methanopyrus kandleri|Rep: Zn-ribbon containing protein
- Methanopyrus kandleri
Length = 87
Score = 36.7 bits (81), Expect = 0.16
Identities = 26/91 (28%), Positives = 38/91 (41%)
Frame = +1
Query: 16 RNMTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASV 195
RN RK R+G + RG V C C VP+ KAI I + + ++D V
Sbjct: 3 RNPRRKGRDGWKQSKSRGKPSFVTCECCGGKVPRHKAIPWTQGFRITDPVVRQAVDDRYV 62
Query: 196 YPMFQLPKLYAKLHYCVSCASTAKLSGTDRR 288
+ + K++YC CA + RR
Sbjct: 63 HTFSR------KVYYCPKCARFLGIRKPKRR 87
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 85 RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 231
R N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 170 RGINESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_A7P6R9 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 858
Score = 32.7 bits (71), Expect = 2.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 198 VYRGIVNISDRRRFYDVPNHELFDGLVLWHAPRAVCASHGF 76
VY G +SD +R ++V E F L+LW++ +HG+
Sbjct: 75 VYAGFGLVSDAQRVFEVSPIECFSNLLLWNSILRANVAHGY 115
>UniRef50_A5Y2D7 Cluster: Concanavalin A-like lectin/glucanase; n=1;
Pyrococcus abyssi virus 1|Rep: Concanavalin A-like
lectin/glucanase - Pyrococcus abyssi virus 1
Length = 678
Score = 31.9 bits (69), Expect = 4.6
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -1
Query: 198 VYRGIVNISDRRRFYDVPNHELFDGLVLWHAPRAVCASHG 79
+Y ++ S+ R+ Y+ P++ DGL+LW+ P + S G
Sbjct: 390 IYNRALSDSEIRQIYENPSNPPLDGLILWYDPYSYDPSTG 429
>UniRef50_Q4Q1C6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 550
Score = 31.9 bits (69), Expect = 4.6
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 154 VEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCASTA 264
V+ AVR + D+ + P ++ LY + Y V+CA+TA
Sbjct: 217 VDHIAVRALEDSGLNPFTEVHDLYMQYLYAVACAATA 253
>UniRef50_Q49HL2 Cluster: SA1_PKSA; n=65; cellular organisms|Rep:
SA1_PKSA - uncultured bacterial symbiont of Discodermia
dissoluta
Length = 25572
Score = 31.5 bits (68), Expect = 6.1
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 208 QLPKLYAKLHYCVSCASTAKLSGTDRRKTEESVLLPRVTSLGTCHVHRQCKGSDLLL 378
+LP L +H CV S A L T VL P+V LG H+HR G DL L
Sbjct: 20079 ELPPLAGVIH-CVGVLSDASLE-TQTWDRFRRVLWPKV--LGAWHLHRATSGQDLEL 20131
>UniRef50_UPI0000F2DC53 Cluster: PREDICTED: similar to Zinc finger
protein 646; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to Zinc finger protein 646 - Monodelphis
domestica
Length = 1709
Score = 31.1 bits (67), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 31 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKK 135
+RR GR + G G AVRC C +P+ ++++
Sbjct: 1386 RRRRAGRVRRGGGPRVAVRCALCGHSLPRRGSLER 1420
>UniRef50_Q0CZR5 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 839
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 183 VNISDRRRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSML 55
V + RR + E+ L+ H A+C SHG + TTSM+
Sbjct: 445 VEAARERRIPVIHRSEMLASLMRHHKSIAICGSHGKSTTTSMV 487
>UniRef50_Q9UL01 Cluster: Dermatan-sulfate epimerase precursor;
n=19; Euteleostomi|Rep: Dermatan-sulfate epimerase
precursor - Homo sapiens (Human)
Length = 958
Score = 31.1 bits (67), Expect = 8.1
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 115 KDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 282
++ AIK ++ + + AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 283 RRKTEESV 306
+R+TEE++
Sbjct: 783 KRQTEEAI 790
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,433,588
Number of Sequences: 1657284
Number of extensions: 6446904
Number of successful extensions: 18435
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 17821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18416
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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