Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0573
(396 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 145 5e-35
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 145 5e-35
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 145 5e-35
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 145 5e-35
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 145 5e-35
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 145 5e-35
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 145 5e-35
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 143 2e-34
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 143 2e-34
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 135 6e-32
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 134 1e-31
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 41 0.001
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 38 0.009
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 37 0.021
Z84488-2|CAI23408.1| 958|Homo sapiens squamous cell carcinoma a... 31 1.4
BC039245-1|AAH39245.1| 958|Homo sapiens dermatan sulfate epimer... 31 1.4
AF098066-1|AAF00087.1| 958|Homo sapiens squamous cell carcinoma... 31 1.4
U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein. 29 7.4
U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein. 29 7.4
EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channe... 29 7.4
BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cat... 29 7.4
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 28 9.7
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 28 9.7
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 28 9.7
AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor, argini... 28 9.7
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 145 bits (351), Expect = 5e-35
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 143 bits (347), Expect = 2e-34
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSC +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCVIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 143 bits (346), Expect = 2e-34
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 135 bits (326), Expect = 6e-32
Identities = 60/83 (72%), Positives = 69/83 (83%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+
Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 61 AYVLPKLYVKLHYCVSCAIHSKV 83
Score = 32.3 bits (70), Expect = 0.60
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ + RTPP
Sbjct: 79 IHSKVVRNRSREACKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 134 bits (324), Expect = 1e-31
Identities = 61/83 (73%), Positives = 70/83 (84%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYP 201
MT+KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD 60
Query: 202 MFQLPKLYAKLHYCVSCASTAKL 270
+ LPKL KLHYCVSC +K+
Sbjct: 61 AYVLPKLCVKLHYCVSCVIHSKV 83
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 79 IHSKVVRNRSREARKDRTPP 98
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/22 (86%), Positives = 22/22 (100%)
Frame = +1
Query: 133 KFVIRNIVEAAAVRDINDASVY 198
KFVIRNIVEAAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 205 FQLPKLYAKLHYCVSCASTAKL 270
+ LPKLY KLHYCVSCA +K+
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKV 22
Score = 35.5 bits (78), Expect = 0.064
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 255 IHSKVVRNRSKKDRRIRTPP 314
IHSKVVRNRS++ R+ RTPP
Sbjct: 18 IHSKVVRNRSREARKDRTPP 37
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 37.1 bits (82), Expect = 0.021
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 22 MTRKRRNGGRAKHGRGHVK 78
MT+KRRN GRAK GRGHV+
Sbjct: 1 MTKKRRNNGRAKKGRGHVQ 19
>Z84488-2|CAI23408.1| 958|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 2 protein.
Length = 958
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 115 KDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 282
++ AIK ++ + + AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 283 RRKTEESV 306
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>BC039245-1|AAH39245.1| 958|Homo sapiens dermatan sulfate epimerase
protein.
Length = 958
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 115 KDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 282
++ AIK ++ + + AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 283 RRKTEESV 306
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>AF098066-1|AAF00087.1| 958|Homo sapiens squamous cell carcinoma
antigen recognized by T cell protein.
Length = 958
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Frame = +1
Query: 115 KDKAIKKFVIRNIVEAAAVRDINDASVYPMFQL--PKLYAKLHYCVSCASTAK--LSGTD 282
++ AIK ++ + + AA+ + N P+FQL ++ +++ S TA+ L +D
Sbjct: 723 RNSAIKSSIVPEVKDYAAIVEQNLQHFKPVFQLLEKQILSRVRNTASFRKTAERLLRFSD 782
Query: 283 RRKTEESV 306
+R+TEE++
Sbjct: 783 KRQTEEAI 790
>U78181-1|AAB48981.1| 528|Homo sapiens sodium channel 2 protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 165 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 52
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>U78180-1|AAB48980.1| 574|Homo sapiens sodium channel 2 protein.
Length = 574
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 165 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 52
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>EU078959-1|ABU48925.1| 528|Homo sapiens acid-sensing ion channel
1a protein protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 165 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 52
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC133707-1|AAI33708.1| 528|Homo sapiens amiloride-sensitive cation
channel 2, neuronal protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 165 RRFYDVPNHELFDGLVLWHAPRAVCASHGFNVTTSMLG 52
R FYD H++ D L+ H VC++ F V + G
Sbjct: 155 REFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG 192
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 261 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 362
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 261 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 362
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 261 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 362
SK + + KKD++ RTPP+S SR + +R
Sbjct: 348 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 381
>AB209694-1|BAD92931.1| 206|Homo sapiens splicing factor,
arginine/serine-rich 12 variant protein.
Length = 206
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 261 SKVVRNRSKKDRRIRTPPKSNFPRDMSRPQAVQR 362
SK + + KKD++ RTPP+S SR + +R
Sbjct: 139 SKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRER 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,164,205
Number of Sequences: 237096
Number of extensions: 983701
Number of successful extensions: 2471
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2470
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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