Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0572
         (420 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   8.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   8.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 401  INKVFD*NTFNYNRYKTMISSTNF*TLTKKNSR 303
            +NK F+ + +++ R    +   N  T    NSR
Sbjct: 1525 VNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 401  INKVFD*NTFNYNRYKTMISSTNF*TLTKKNSR 303
            +NK F+ + +++ R    +   N  T    NSR
Sbjct: 1525 VNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 401  INKVFD*NTFNYNRYKTMISSTNF*TLTKKNSR 303
            +NK F+ + +++ R    +   N  T    NSR
Sbjct: 1525 VNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -2

Query: 401  INKVFD*NTFNYNRYKTMISSTNF*TLTKKNSR 303
            +NK F+ + +++ R    +   N  T    NSR
Sbjct: 1525 VNKAFEEDNYDHRRNSLQMQQRNNVTWKSSNSR 1557


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 148 LIVGIHYFLFHWMGLYMSQIQY 83
           +I  IH+ +F  +  Y+S ++Y
Sbjct: 1   MIFKIHFLVFGALLTYVSSVEY 22


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 118 HWMGLYMSQIQYY 80
           HW G++    QYY
Sbjct: 200 HWHGVWQRGSQYY 212


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 118 HWMGLYMSQIQYY 80
           HW G++    QYY
Sbjct: 200 HWHGVWQRGSQYY 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,159
Number of Sequences: 336
Number of extensions: 1485
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)