Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0572
         (420 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila...    26   9.5  

>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
           protein F54F2.1 protein.
          Length = 1226

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 252 SDANPGRLNQTNFFINRPGIFFGQ 323
           S A PG+ NQ   FI  PG+++ Q
Sbjct: 195 SAAVPGKKNQNRVFIGAPGVWYWQ 218


>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
            roughdeal) homologprotein 1 protein.
          Length = 2049

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = -2

Query: 149  SNSRNSLFFISLDGIIYESNSILLKSEYS----YLQYH 48
            S+S NS   +S D ++YE NS+++    S    YL +H
Sbjct: 1602 SDSYNSDLALSSDAMVYERNSVIISDLPSLAEQYLPFH 1639


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,654,080
Number of Sequences: 27780
Number of extensions: 131683
Number of successful extensions: 184
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)