Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0569
(631 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0690 + 26303733-26306540 29 2.3
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 29 2.3
12_02_0814 - 23410278-23411854,23411933-23412166,23412688-234127... 29 3.0
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 29 3.0
12_02_0356 + 17915029-17916236,17932970-17933283,17933936-179342... 29 4.0
10_06_0121 - 10987553-10987648,10990674-10991398,10991452-109918... 29 4.0
10_03_0003 + 6865111-6865223,6867322-6867796 29 4.0
09_06_0087 + 20771329-20771450,20771462-20771771,20771893-207726... 29 4.0
06_03_1377 - 29692895-29692899,29700435-29702190 29 4.0
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 29 4.0
05_01_0105 + 696604-696846,696880-697989 29 4.0
12_02_0034 - 12539201-12540439 28 7.0
05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 28 7.0
03_06_0587 - 34921535-34922041,34922579-34922689 28 7.0
12_01_0914 + 8901915-8902574 27 9.3
06_03_0368 - 19966741-19967204,19967279-19967450 27 9.3
04_04_1489 - 33938426-33939363,33939429-33939813 27 9.3
04_03_0045 + 10107994-10108076,10108289-10108529,10108571-10108789 27 9.3
>11_06_0690 + 26303733-26306540
Length = 935
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 446 QCFKCCRYGHVKDMCRSNPRC 508
+CF C GH+K C+ PRC
Sbjct: 93 RCFCCLGLGHLKADCKGAPRC 113
>01_06_0595 - 30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 191 FSNGYCERDSQRMVYRRGDSEFSVPPGCGSVLKARRLKKKTFIDNKTSFIDTETVVLTFD 370
FS+G E +S RR ++ S P G RRLKK +KT+++ ++ +LT +
Sbjct: 867 FSHG--ENESSNTTLRRSFTKHS-PLSSGGENLRRRLKKDRASSSKTTWMQSDPHILT-E 922
Query: 371 GQIL 382
G+I+
Sbjct: 923 GEII 926
>12_02_0814 -
23410278-23411854,23411933-23412166,23412688-23412725,
23412872-23412948
Length = 641
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 449 CFKCCRYGHVKDMCRSNPRCLN 514
CF C GH K C + RC N
Sbjct: 132 CFNCLGLGHQKSACPGSTRCYN 153
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 446 QCFKCCRYGHVKDMCRSNPRCLNVAR 523
+C++C GH++ C+++PR L+ +R
Sbjct: 172 KCYRCGERGHIERNCQNSPRNLSRSR 197
>12_02_0356 +
17915029-17916236,17932970-17933283,17933936-17934244,
17934613-17935439
Length = 885
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 255 ECGEKGHFASKCPSKDD 271
>10_06_0121 -
10987553-10987648,10990674-10991398,10991452-10991848,
10993613-10993633
Length = 412
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 175 ECGEKGHFASKCPSKDD 191
>10_03_0003 + 6865111-6865223,6867322-6867796
Length = 195
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 171 ECGEKGHFASKCPSKDD 187
>09_06_0087 +
20771329-20771450,20771462-20771771,20771893-20772672,
20772854-20774002
Length = 786
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 446 QCFKCCRYGHVKDMCRSNPRC 508
+CF+C GH+K C P C
Sbjct: 70 RCFRCLGLGHLKASCSQPPTC 90
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 280 ECGEKGHFASKCPSKDD 296
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 280 ECGEKGHFASKCPSKDD 296
>05_01_0105 + 696604-696846,696880-697989
Length = 450
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 269 ECGEKGHFASKCPSKDD 285
>12_02_0034 - 12539201-12540439
Length = 412
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSED 558
+CG+ GHF S C S+D
Sbjct: 280 ECGEKGHFASKCPSKD 295
>05_01_0148 -
985745-986180,986290-986385,986498-986694,986824-986919,
987020-987059,987751-987857
Length = 323
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 446 QCFKCCRYGHVKDMCRSNPRCLNVAR 523
+C++C GH++ C+++PR L R
Sbjct: 125 KCYRCGERGHIERNCQNSPRNLRRER 150
>03_06_0587 - 34921535-34922041,34922579-34922689
Length = 205
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSED 558
KCGK GHF C S D
Sbjct: 130 KCGKPGHFARECPSGD 145
>12_01_0914 + 8901915-8902574
Length = 219
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG+ GHF S C S+D+
Sbjct: 199 ECGEKGHFVSKCLSKDD 215
>06_03_0368 - 19966741-19967204,19967279-19967450
Length = 211
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 443 IQCFKCCRYGHVKDMCRSNPRCLN--VARMVILEA 541
I+C +C ++GH D C PR + VA++ I +A
Sbjct: 171 IECCRCGKFGHFADEC-DEPRKMTKAVAQLAIADA 204
>04_04_1489 - 33938426-33939363,33939429-33939813
Length = 440
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 511 KCGKDGHFGSSCTSEDE 561
+CG++GHF C S+D+
Sbjct: 192 ECGENGHFACKCPSKDD 208
>04_03_0045 + 10107994-10108076,10108289-10108529,10108571-10108789
Length = 180
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 514 CGKDGHFGSSC 546
CG DGHFG++C
Sbjct: 140 CGNDGHFGTNC 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,967,128
Number of Sequences: 37544
Number of extensions: 320517
Number of successful extensions: 1014
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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