Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0567
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BYI2 Cluster: Chromosome undetermined scaffold_137, w...    35   2.3  
UniRef50_Q5ZA15 Cluster: Putative uncharacterized protein B1140D...    33   7.2  
UniRef50_Q3DZ37 Cluster: Similar to Uncharacterized enzyme of ph...    33   9.5  
UniRef50_Q8IJH4 Cluster: Dynein heavy chain, putative; n=2; Plas...    33   9.5  
UniRef50_O44048 Cluster: Asparagine-rich protein; n=4; Plasmodiu...    33   9.5  

>UniRef50_A0BYI2 Cluster: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_137,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 120

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 371 CHYCSCCAWL-YFNFINYSTRIFYQCIDI 288
           C  C+CC WL Y+ F+N   R    CID+
Sbjct: 11  CAVCTCCCWLNYYGFLNNCVRGCQICIDV 39


>UniRef50_Q5ZA15 Cluster: Putative uncharacterized protein
           B1140D12.19; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           B1140D12.19 - Oryza sativa subsp. japonica (Rice)
          Length = 94

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +2

Query: 500 RAKG*ARREHRGTWDWTVRRCLKRTAGKDDI*GPTH*TIPLHSRP 634
           R +G ARR  R  W   V     RTAG ++     H   P H RP
Sbjct: 25  RRRGEARRRRRRRWGGEVSAAASRTAGAEEARRRRHHDAPAHRRP 69


>UniRef50_Q3DZ37 Cluster: Similar to Uncharacterized enzyme of
           phosphonate metabolism; n=3; Chloroflexaceae|Rep:
           Similar to Uncharacterized enzyme of phosphonate
           metabolism - Chloroflexus aurantiacus J-10-fl
          Length = 139

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 710 VLHRALRQPGEPFTPVRPDLARIGH 636
           +L  ALR PG+P   +RP +A +GH
Sbjct: 92  ILDAALRMPGDPHADLRPKIAALGH 116


>UniRef50_Q8IJH4 Cluster: Dynein heavy chain, putative; n=2;
           Plasmodium|Rep: Dynein heavy chain, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 5687

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = -1

Query: 368 HYCSCCAWLYFNFINYSTRIFYQCIDITKKNCCTNTSTHVHYVKRK*RRQPFCDIYILNF 189
           H+  C   +  NF+NY  + +  C +  K  C  N S  ++Y+  +  ++ F +  I+N 
Sbjct: 187 HFIKCYHIILRNFMNYKKKEYINCYEFLK--CLKNKSEDINYLYNEIDKESFQE--IINI 242

Query: 188 IL 183
           IL
Sbjct: 243 IL 244


>UniRef50_O44048 Cluster: Asparagine-rich protein; n=4;
           Plasmodium|Rep: Asparagine-rich protein - Plasmodium
           falciparum
          Length = 612

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 386 KTSRNCHYCSCCAWLYFNFINYSTRIFYQCIDITKKN 276
           K +  C YC C    ++N I Y    F +C+D+ KKN
Sbjct: 576 KIAMECEYCDCEHCYFYNCI-YCNFDFQKCLDMIKKN 611


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,825,607
Number of Sequences: 1657284
Number of extensions: 13002360
Number of successful extensions: 29944
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29915
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)