Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0565
(616 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 1.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 1.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.0
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 3.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.2
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 21 6.2
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/48 (27%), Positives = 16/48 (33%)
Frame = +3
Query: 363 HQGHHLQCPDAXXXXXXXXXXXXXXXXXXTCWLHQQHPAHQPSQWKQQ 506
H GHH+Q +HQQ P HQ +QQ
Sbjct: 166 HMGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQ 213
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.4 bits (48), Expect = 1.5
Identities = 13/48 (27%), Positives = 16/48 (33%)
Frame = +3
Query: 363 HQGHHLQCPDAXXXXXXXXXXXXXXXXXXTCWLHQQHPAHQPSQWKQQ 506
H GHH+Q +HQQ P HQ +QQ
Sbjct: 168 HMGHHMQEQHPQHHQPHHQQQHMMYGGQQGANMHQQGPPHQQPPIQQQ 215
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 89 SNSNATKSSGLTSPLSVSTSPPGKPATST 117
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 2.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 61 SPSNSTTTSRSVSPGPRVLDAPRKPLTST 147
S SN+T +S SP P KP TST
Sbjct: 133 SNSNATKSSGLTSPLSVSTSPPGKPATST 161
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 320 SSPSLLAQLKSSPEAP--GSPPPMSR 391
SSP L ++ SP P SPPP R
Sbjct: 83 SSPILAEKVSVSPTTPPTPSPPPEER 108
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 6.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 320 SSPSLLAQLKSSPEAPGSPPPMSR 391
S PS + ++ E PG PP R
Sbjct: 980 SEPSETVTIITAEEVPGGPPTSIR 1003
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 246 GVPTDQHPLRDRRSXLEDQESPGS--SVH 326
G PTD P + + + ++D SPG S+H
Sbjct: 219 GEPTDLTPEQIQAAEVKDFPSPGGFPSIH 247
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,405
Number of Sequences: 336
Number of extensions: 2882
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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