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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0564
         (628 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   1.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   6.4  

>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +1

Query: 289 TAAHCWRTRRAQARXFTLALGTANIFSGGTRVTTSNVQMHGSYNMDTLH 435
           T A    T+R + +  TLA+   N + G   + T      G +  ++LH
Sbjct: 4   TGADRLMTQRCKEKLNTLAISVMNQWPGVRLLVTEGWDEEGYHTPESLH 52


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 517 TLLVLGPGLQASEGPPMLLREP 582
           TLLVLG   +     P+ +REP
Sbjct: 8   TLLVLGASAEDDTSGPVFVREP 29



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 338  PSXLAQLTSSPEAPGSPPPMSR 403
            PS    + ++ E PG PP   R
Sbjct: 982  PSETVTIITAEEVPGGPPTSIR 1003


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 224 SQVQQDGGEHQRWRQNHPQSWYRRSQRL 141
           S V  D G   + +  H   W+RR  RL
Sbjct: 2   SGVVGDAGRASKGQDKHMVHWFRRGLRL 29


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 346 LGTANIFSGGTRVTTSNVQMHGSYNMDTLHNYVAIIN 456
           LGT  + S G +  T    +  +++   L  +VAI N
Sbjct: 118 LGTGLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFN 154


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 346 LGTANIFSGGTRVTTSNVQMHGSYNMDTLHNYVAIIN 456
           LGT  + S G +  T    +  +++   L  +VAI N
Sbjct: 118 LGTGLLTSTGLKWQTRRKILTPAFHFSILQQFVAIFN 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,961
Number of Sequences: 336
Number of extensions: 2319
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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