Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0564
(628 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 31 0.58
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 31 1.0
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.8
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 2.3
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 28 7.1
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 28 7.1
SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 27 9.4
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 27 9.4
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 205 PSCWTCDRTDEWQNFHL-GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTR 381
P W + ++ H+ GASLLT ++TAAHC T A +TL G + G
Sbjct: 249 PHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQV 307
Query: 382 VTTSNVQMHGSYNMDTLHNYVAIIN-HNHVGFTNNIQRINLASE 510
S ++ H ++M + N VA++ +V ++ + I L S+
Sbjct: 308 FGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICLPSQ 351
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.5 bits (78), Expect = 0.036
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 244 NFHLGASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTRVTTSNVQ---MHGS 414
NF G SL+++T VTAAHC R + + + +G N T NV+ H
Sbjct: 499 NFICGGSLVSSTWVVTAAHC-VARSSNPAQYQIIVGEHNRNVNEVTEETLNVKKVIAHPQ 557
Query: 415 YNMDTLHNYVAII 453
YN L N +A+I
Sbjct: 558 YNNPRLSNDIALI 570
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 31.5 bits (68), Expect = 0.58
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 256 GASLLTNTRSVTAAHCWRTRRAQARXFTLALGT-ANIFSGGTRV-TTSNVQMHGSYNMDT 429
GASLL+ ++TAAHC + R + +TLA G + +V S V H ++M
Sbjct: 112 GASLLSPGWALTAAHCVQ-RSSNPADYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGH 170
Query: 430 LHNYVAII 453
L N V ++
Sbjct: 171 LRNDVTLL 178
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 250 HLGASLLTNTRSVTAAHCWRTRRAQARXFTLALGT--ANIFSGGTRVTTSNVQMHGSYNM 423
+ G SL+ + +TAAHC ++R L + ++ + + S + H +YN
Sbjct: 416 YCGGSLIHSNWVLTAAHCISSKRPAEVVVRLGAHSRLGSLTTDMQDIKVSAIITHSNYNS 475
Query: 424 DTLHNYVAII 453
T++N +A++
Sbjct: 476 RTMYNDIALL 485
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +1
Query: 223 DRTDEWQNFHL-GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTRVTTSNV 399
++T H+ G SLL++T +TAAHC R +T+ +G GT S
Sbjct: 329 NKTATLNGHHICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAF 387
Query: 400 QMHGSY--NMDTLHNYVAIINHNHVGFTNNIQRINLASEATTL 522
H Y D H+ I F+ + + L + L
Sbjct: 388 YKHEKYVGGKDKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLL 430
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 93 TSRSVSPGPRVLDAPRKPL 149
TS P PRVLD+PRKPL
Sbjct: 379 TSLLAYPTPRVLDSPRKPL 397
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 76 GLFCHDHGRQRHQYCCEDLHDYYQL 2
G FCH H R CC+DL Y +
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSYTI 625
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTRVTTS----NVQMHGSYNM 423
G SL+ VTAAHC R +T+ +G A+ +G T V + + H ++M
Sbjct: 58 GGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVG-AHHRTGNTPVQNTFRLKQLFKHEQFSM 115
Query: 424 DTLHNYVAIIN-HNHVGFTNNIQRINLASEAT 516
L N +A++ H V ++ + + L S +
Sbjct: 116 RHLKNDIALLQLHEPVKASDKVNTVCLPSSGS 147
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.3 bits (60), Expect = 5.4
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +1
Query: 247 FHL-GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTRV----TTSNVQMHG 411
FH G SL+++ VTAAHC R +T+ +G A+ G T V S + H
Sbjct: 129 FHTCGGSLISDRWVVTAAHCIH-RNKNPGGYTVVVG-AHKKRGSTSVQQSLRLSQIIEHP 186
Query: 412 SYNMDTLHNYVAII 453
YN + N +A++
Sbjct: 187 KYNDRRIVNDIALL 200
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Frame = +1
Query: 205 PSCWTCDRTDEWQNFHL-GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTR 381
P W + + H+ G SLL+ +TAAHC R + +T+ +G GT
Sbjct: 39 PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSADYTVIVGAHKRVLDGTE 97
Query: 382 VTTSNVQMHGSY--NMDTLHNYVAIINHNHVGFTNNIQRINLASE 510
S H Y D H+ I F+ + + L +
Sbjct: 98 HKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPVCLPKQ 142
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +1
Query: 244 NFHL-GASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGT----RVTTSNVQMH 408
++H G SL+ + +TAAHC R R +++ +G A+ G T +++ S + H
Sbjct: 64 DYHFCGGSLIDSEWVLTAAHCVAGIR-NPRRYSVYVG-AHELDGTTQVEEKISISKIYSH 121
Query: 409 GSYNMDTLHNYVAII 453
Y+ L + VA+I
Sbjct: 122 EKYSSSLLTSDVALI 136
>SB_18510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +1
Query: 373 GTRVTTSNVQMHGSYNMDTLHNYVAIINHNHVGFTNNIQRINLASEATTLLVLGPGLQAS 552
G ++ +N HG + +++ + ++ + +V FT + INL T LV P L +
Sbjct: 375 GKKIIPNNQSKHGHRKLKRINSNMNLVKYENVSFTMLLIIINLFMCYTVYLVFLPLLYFA 434
Query: 553 EG 558
G
Sbjct: 435 IG 436
>SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 220 KSSKMGVSTSVGGRTTHNPGTVEVSGFLGASKTLGPG 110
KSSK S+S TTH P V + T GPG
Sbjct: 61 KSSKSSKSSSTSSSTTHGPTPVPATPSSPPRPTPGPG 97
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/84 (27%), Positives = 33/84 (39%)
Frame = +1
Query: 208 SCWTCDRTDEWQNFHLGASLLTNTRSVTAAHCWRTRRAQARXFTLALGTANIFSGGTRVT 387
+C TCD E GA ++ + + W+ Q R F L G + S VT
Sbjct: 827 TCLTCDCVSECGRKPAGARIINGQNAQPHSWPWQISLRQGRRFHLCGGA--LISDRWVVT 884
Query: 388 TSNVQMHGSYNMDTLHNYVAIINH 459
S+ +H N + VAI H
Sbjct: 885 ASHC-IHDDLNPGSYMVVVAISRH 907
>SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 60 SWQKSPSNSTTTSRSVSPG-PRVLDAP 137
S+ K SNS T S S SPG P VL+ P
Sbjct: 14 SYPKRNSNSHTASNSCSPGDPLVLERP 40
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 254 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 171
RW + + ++++DG H RW NHP
Sbjct: 77 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 103
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 254 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 171
RW + + ++++DG H RW NHP
Sbjct: 165 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 191
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 244 SAIRQCDHKSSKMGVSTSVGGRTTHNPGTVEVSGF 140
+A R CD +S S TTH G +++GF
Sbjct: 267 AANRDCDDSASSTSDKESAPDETTHASGNTKLTGF 301
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 220 KSSKMGVSTSVGGRT-THNPGTVEVSGFLGASKTLGPGDTDLD 95
KS+++ V G + TH G VEVSG L LG + + D
Sbjct: 1190 KSAQLDVKEGKGYKQLTHQLGLVEVSGLLRCRGRLGNSELEAD 1232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,172,982
Number of Sequences: 59808
Number of extensions: 308855
Number of successful extensions: 1387
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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