Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0562
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.21 
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   1.9  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   3.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.5  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 355 YDDXRPNLVQPNDISL 402
           YDD R  L+ PND+S+
Sbjct: 187 YDDLRDQLLMPNDVSI 202



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 519 RLWTNGATPEVLN 557
           ++WT G+ P+V N
Sbjct: 444 QIWTTGSDPQVRN 456


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 50  FPKKSSPTSLKISTKM*IPQISVLYLVGRR 139
           +P K     L I TKM + Q+S  +   RR
Sbjct: 111 YPTKGEKIMLAIITKMTLTQVSTWFANARR 140


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 229 EWVITAAHWLPDASRWSF 282
           +++I + HW+     WSF
Sbjct: 131 QFIIISKHWVTIMKEWSF 148


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 228 GVGDHCSSLVAGRITVVIRAGVTNLTTPEYISEST 332
           GVG + + LVA ++TVV +    N    +Y+ ES+
Sbjct: 128 GVGFYSAYLVADKVTVVSK----NNDDEQYVWESS 158


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +2

Query: 308  SGIHFGIDRMVQLPTRMTTRGLTWYSPTTS 397
            +G+  G      +    TT+  TW+S TT+
Sbjct: 1019 TGVDTGASSTEHMHPDWTTKPSTWWSSTTT 1048


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,419
Number of Sequences: 336
Number of extensions: 3912
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)