Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0562
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 41 6e-04
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 34 0.088
Z81517-1|CAB04208.1| 520|Caenorhabditis elegans Hypothetical pr... 31 0.82
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 2.5
AL137227-3|CAE11315.1| 62|Caenorhabditis elegans Hypothetical ... 29 3.3
AL137227-2|CAB70237.2| 188|Caenorhabditis elegans Hypothetical ... 29 3.3
AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical ... 29 3.3
U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical pr... 27 7.6
U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical pr... 27 7.6
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 41.1 bits (92), Expect = 6e-04
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 115 RIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHWLPDASR-WSFAPA 291
R+V G+E PG P AALR + CG SI+ + +ITAAH + R S+
Sbjct: 26 RVVGGFETVPGAFPWTAALR--NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVV 83
Query: 292 LRT*PLRNTFRNRQNGTTTHTYDDXRPNLVQPNDISLLRLHRP-VVFTRYLQPIRVQS 462
+ T N Q + + +DI++L + P + F Y QPI + S
Sbjct: 84 VGDWDNNQTDGNEQIFYLQRIHFYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 33.9 bits (74), Expect = 0.088
Identities = 29/123 (23%), Positives = 55/123 (44%)
Frame = +1
Query: 94 DVDTTNLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHWLPDASR 273
D T + R++ G E++P P ++++ G CGGS++ +V+TAAH R
Sbjct: 50 DYVTLDHRLIGGSESSPHSWPW--TVQLLSRLGH-HRCGGSLIDPNFVLTAAHCFA-KDR 105
Query: 274 WSFAPALRT*PLRNTFRNRQNGTTTHTYDDXRPNLVQPNDISLLRLHRPVVFTRYLQPIR 453
+ ++R R+ + T + D +++R+H PV + +PI
Sbjct: 106 RPTSYSVRVGGHRSGSGSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPIC 165
Query: 454 VQS 462
+ S
Sbjct: 166 LPS 168
>Z81517-1|CAB04208.1| 520|Caenorhabditis elegans Hypothetical
protein F28B1.1 protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 412 HRPVVFTRYLQPIRVQSSADAFR-NYDGLTVYATVMVVSGRMVLLP 546
++PVVF+ +PI + A A Y+ +T +A++ VV+G V P
Sbjct: 466 YKPVVFSANNEPIEISDQAPAIECAYNPMTNFASMWVVNGIRVFDP 511
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/101 (26%), Positives = 37/101 (36%)
Frame = +1
Query: 109 NLRIVSGWEATPGQHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHWLPDASRWSFAP 288
+ RI+ G G + A L G CG +++ W++TAAH SF
Sbjct: 35 SFRIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVY 93
Query: 289 ALRT*PLRNTFRNRQNGTTTHTYDDXRPNLVQPNDISLLRL 411
P N R R N NDI+LLR+
Sbjct: 94 VRE--PKNN--RERSFSVKEAYIHSGYNNQTADNDIALLRI 130
>AL137227-3|CAE11315.1| 62|Caenorhabditis elegans Hypothetical
protein F58D5.2b protein.
Length = 62
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 232 WVITAAHWLPDASRWSFAPALRT 300
WV AAHW W+ PAL T
Sbjct: 2 WVFCAAHWAEMNPEWATMPALAT 24
>AL137227-2|CAB70237.2| 188|Caenorhabditis elegans Hypothetical
protein F58D5.2a protein.
Length = 188
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 232 WVITAAHWLPDASRWSFAPALRT 300
WV AAHW W+ PAL T
Sbjct: 128 WVFCAAHWAEMNPEWATMPALAT 150
>AL023834-1|CAA19481.1| 177|Caenorhabditis elegans Hypothetical
protein Y32B12A.1 protein.
Length = 177
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 373 NLVQPNDISLLRLHRPVVFTRYLQPIRVQSSADAFRNYDGLTVYATVMVVSGRMVL 540
NL N I + LH+ F + + R SA F+ +DG +AT + + V+
Sbjct: 46 NLSTCNKIIRMDLHQDEAFDQLHRKAREMISASQFKMFDGSHAHATPEITNSSQVM 101
>U40029-5|AAA81125.2| 457|Caenorhabditis elegans Hypothetical
protein F10G7.5a protein.
Length = 457
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 148 QHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHWLPD 264
QH + A L + GG+ + G SI + + TA W PD
Sbjct: 110 QHSYAATLLTM---GGIASVGSSIAYSSILPTAQRWFPD 145
>U40029-4|ABD94116.1| 471|Caenorhabditis elegans Hypothetical
protein F10G7.5b protein.
Length = 471
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 148 QHPHHAALRMVDPTGGVFACGGSIVHREWVITAAHWLPD 264
QH + A L + GG+ + G SI + + TA W PD
Sbjct: 124 QHSYAATLLTM---GGIASVGSSIAYSSILPTAQRWFPD 159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,125,074
Number of Sequences: 27780
Number of extensions: 370094
Number of successful extensions: 1022
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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