Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0562
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42370.1 68418.m05159 expressed protein 31 0.58
At1g30220.1 68414.m03697 sugar transporter family protein simila... 30 1.3
At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid t... 29 2.3
At2g43330.1 68415.m05388 sugar transporter family protein simila... 29 2.3
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 29 2.3
At1g34580.1 68414.m04298 monosaccharide transporter, putative si... 28 4.1
At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /... 28 5.4
At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /... 28 5.4
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 28 5.4
At4g16480.1 68417.m02495 sugar transporter family protein simila... 28 5.4
At3g42060.1 68416.m04315 myosin heavy chain-related 28 5.4
At3g19940.1 68416.m02524 sugar transporter, putative similar to ... 27 7.1
At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase, pu... 27 7.1
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 27 9.4
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 27 9.4
>At5g42370.1 68418.m05159 expressed protein
Length = 447
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 293 YELDHSGIHFGIDRMVQLPTRMTTRGLTWYSPTT 394
Y++ SG+ ++++V P R R L WY+P+T
Sbjct: 287 YDVTSSGLVQSVEKVVPRPLRSIVRLLFWYTPST 320
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 246 SSLVAGRITVVIRAGVTNLTTPEYISEST 332
S LV GR+ V + G+ ++T P YISE++
Sbjct: 122 SLLVVGRVFVGLGVGMASMTAPLYISEAS 150
>At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 203
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 560 PVQDLGSSTIRPETTMTVAYTVSPS 486
P D G ST RP T + AY +SPS
Sbjct: 165 PTSDDGGSTSRPSETPSSAYALSPS 189
>At2g43330.1 68415.m05388 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens], SP|Q01440 Membrane transporter D1
{Leishmania donovani}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 509
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 252 LVAGRITVVIRAGVTNLTTPEYISEST 332
L++GR+ V + GV ++T P YI+E++
Sbjct: 127 LISGRLLVGLGVGVASVTAPVYIAEAS 153
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 186 WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 70
WI A+G + L GS NT I ++F +FNEV
Sbjct: 903 WILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEV 941
>At1g34580.1 68414.m04298 monosaccharide transporter, putative
similar to monosaccharide transporter 3 [Oryza sativa]
GI:11991114, monosaccharide transporter [Nicotiana
tabacum] GI:19885, monosaccharide transporter 1 [Oryza
sativa] GI:11991110; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 506
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 228 GVGDHCSSLVAGRITVVIRAGVTNLTTPEYISE 326
G+ + + L++GRI + G TN P Y+SE
Sbjct: 128 GLAANIAMLISGRILLGFGVGFTNQAAPVYLSE 160
>At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 447
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 79 EDINKDVDTTNLRIVSGWEATPGQHPHHAAL 171
E+ ++L +S W+ P QHPHH L
Sbjct: 325 EEFRNTTVNSDLHFIS-WDNPPKQHPHHLTL 354
>At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 434
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +1
Query: 106 TNLRIVSGWEATPGQHPHHAAL----RMVD 183
++L +S W+ P QHPHH L RMVD
Sbjct: 321 SDLHFIS-WDNPPKQHPHHLTLDDFQRMVD 349
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 186 WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 70
WI A+G + L G NT I ++F +FNE+
Sbjct: 902 WILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEI 940
>At4g16480.1 68417.m02495 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 582
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 252 LVAGRITVVIRAGVTNLTTPEYISEST 332
++ GRI V G+ ++T+P YISE++
Sbjct: 123 IIVGRIFVGFGVGMASMTSPLYISEAS 149
>At3g42060.1 68416.m04315 myosin heavy chain-related
Length = 712
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 70 YFIEDINKDVDTTNLRIVSGWEATPGQHPHHAA 168
+F + + VD TNL V+ W PG P H A
Sbjct: 301 FFAKLSDVSVDDTNLSCVNIWNFNPGFVPRHEA 333
>At3g19940.1 68416.m02524 sugar transporter, putative similar to
sugar transport protein [Arabidopsis thaliana] GI:16524;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 514
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 246 SSLVAGRITVVIRAGVTNLTTPEYISE 326
S L+ GR+ + + G N +TP Y+SE
Sbjct: 136 SMLIIGRLLLGVGVGFANQSTPVYLSE 162
>At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 305
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Frame = +2
Query: 476 SGTTTDSPCMP-----RSWSSLDEWCYSRG 550
+GTTT SPC P S SS EW RG
Sbjct: 231 NGTTTTSPCSPGDSTSSSSSSTSEWFSQRG 260
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 521 SLDEWCYSRGPELGILACCR 580
S+ WC+ R P L IL C +
Sbjct: 255 SVASWCHPRAPNLDILTCVK 274
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 425 SLPDTSSQFVCNRRLMPSGTTTDS-PCMPRSWSSLDEWCYSRGPEL 559
+ PD S+ RL+ GT+ + P R WSSL ++C +L
Sbjct: 708 TFPDFSTNI---ERLLLIGTSVEEVPASIRHWSSLSDFCIKNNEDL 750
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,420,188
Number of Sequences: 28952
Number of extensions: 352830
Number of successful extensions: 1015
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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