Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0561
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 26 1.0
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 2.4
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 25 2.4
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 2.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 2.4
AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein prot... 23 5.6
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 5.6
CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein ... 23 7.4
AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding pr... 23 7.4
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 23 9.8
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 23 9.8
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.8 bits (54), Expect = 1.0
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 447 ILESVGIGHSEVSSARRALQETKNA--QKSASPGDSKIIRSRNGLL 578
+L++ H+ S R A + + SASPG +KI+ SR L
Sbjct: 116 LLQTASTPHNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTL 161
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 24.6 bits (51), Expect = 2.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 65 EQGVPASTTANYNKGESYYRPVLDRLDG 148
E+G PA NYNKG+ P D L+G
Sbjct: 212 EKGEPARHPENYNKGQK-GEPGNDGLEG 238
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.6 bits (51), Expect = 2.4
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 363 KKTSRFADDIDFENSVANLENRMRISDKILESVGIGHSEVSSARRALQETKNAQKSASPG 542
KKT R + E+ + LENR++ S LE+ ++ R L++ P
Sbjct: 703 KKTRRQGELTTVESQIRGLENRLKYSMNDLET---SKKNINEYDRQLEDFTRELDQIGPK 759
Query: 543 DSKIIR 560
S+I R
Sbjct: 760 ISEIER 765
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 24.6 bits (51), Expect = 2.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +3
Query: 204 TASRAPCTTWKHPTMNCRLQRCTRP 278
++ R P W+H + RC++P
Sbjct: 221 SSRRIPAVVWRHQRTGAVIARCSQP 245
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 24.6 bits (51), Expect = 2.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +3
Query: 204 TASRAPCTTWKHPTMNCRLQRCTRP 278
++ R P W+H + RC++P
Sbjct: 221 SSRRIPAVVWRHQRTGAVIARCSQP 245
>AJ297932-1|CAC35452.1| 90|Anopheles gambiae gSG1a protein
protein.
Length = 90
Score = 23.4 bits (48), Expect = 5.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 204 TASRAPCTTWKHPTMNCRLQRCTRPAG 284
+AS A CT TM RL + +PAG
Sbjct: 21 SASSAACTLQVPETMITRLLQADQPAG 47
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.4 bits (48), Expect = 5.6
Identities = 11/36 (30%), Positives = 15/36 (41%)
Frame = -1
Query: 447 FCQKSSFGFRDWQRCSQSRCHQRTSKSFSGAQAFQR 340
FC S G +W+ C ++ T K G QR
Sbjct: 184 FCSPSLVGDNNWRVCDETPSDHNTIKFVVGRVPRQR 219
>CR954256-6|CAJ14147.1| 207|Anopheles gambiae predicted protein
protein.
Length = 207
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 458 AFEYFVRNPHSVFEI 414
A EYFV N H V+ +
Sbjct: 89 ALEYFVENGHEVYAV 103
>AY146749-1|AAO12064.1| 336|Anopheles gambiae odorant-binding
protein AgamOBP38 protein.
Length = 336
Score = 23.0 bits (47), Expect = 7.4
Identities = 12/56 (21%), Positives = 20/56 (35%)
Frame = +3
Query: 138 VWTAKRL*FANPNAKVFELMSTTASRAPCTTWKHPTMNCRLQRCTRPAGQTSLFCL 305
+W + + + + + E R CT W P R ++ RP CL
Sbjct: 265 LWEVLKQEYGSSDDALAEESEQVVVRRSCTPWMRPLKMGRNRQKARPRRMRKSSCL 320
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 22.6 bits (46), Expect = 9.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 3 FPDAYTRSRVPKTKQDEPCWK 65
FPD Y+ KT + E C++
Sbjct: 336 FPDRYSYKMHAKTHEGEKCYR 356
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 22.6 bits (46), Expect = 9.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 6 PDAYTRSRVPKTKQDEPCWK 65
P Y SR+ +T Q CWK
Sbjct: 32 PYHYDYSRIQETDQAWKCWK 51
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,676
Number of Sequences: 2352
Number of extensions: 11444
Number of successful extensions: 45
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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